Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.36□□□□□ -1.55
COL6A2P12110 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL6A2P12110 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
COL6A2P12110 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 STX3-208ENST00000641815 3236 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 ADAM5-202ENST00000399789 1942 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.35□□□□□ -1.55
COL6A2P12110 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 AC025574.1-201ENST00000554784 1653 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 Y_RNA.296-201ENST00000364930 108 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 RN7SKP153-201ENST00000365026 316 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 MTCO3P40-201ENST00000392516 676 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 GSTA9P-201ENST00000406231 611 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AL590002.1-201ENST00000406554 418 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.35□□□□□ -1.55
COL6A2P12110 FCF1P10-201ENST00000407590 479 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 CTSL3P-202ENST00000412179 788 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.35□□□□□ -1.55
COL6A2P12110 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.35□□□□□ -1.55
COL6A2P12110 AC233728.2-201ENST00000425348 757 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 MTND4P28-201ENST00000426217 387 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 RPL37P1-201ENST00000432310 284 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.35□□□□□ -1.55
COL6A2P12110 AL662791.1-201ENST00000441992 928 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 MTND5P20-201ENST00000448677 143 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.35□□□□□ -1.55
COL6A2P12110 MTND2P24-201ENST00000453434 806 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
COL6A2P12110 AC010301.1-201ENST00000473936 355 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 RPL15P21-201ENST00000495592 567 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.35□□□□□ -1.55
COL6A2P12110 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.35□□□□□ -1.55
COL6A2P12110 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL6A2P12110 AC010342.1-201ENST00000514047 877 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 RN7SKP96-201ENST00000516948 297 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.35□□□□□ -1.55
COL6A2P12110 NRBF2P4-201ENST00000520874 850 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.35□□□□□ -1.55
COL6A2P12110 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.35□□□□□ -1.55
COL6A2P12110 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.35□□□□□ -1.55
COL6A2P12110 AC068714.1-201ENST00000559623 800 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.35□□□□□ -1.55
COL6A2P12110 MRPS21P7-201ENST00000566937 238 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.35□□□□□ -1.55
COL6A2P12110 AC127024.5-201ENST00000580085 462 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.35□□□□□ -1.55
COL6A2P12110 AP000769.2-201ENST00000602344 396 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC091965.4-201ENST00000607691 587 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 MIR6862-1-201ENST00000613016 70 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 MIR6862-2-201ENST00000614755 70 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC002553.4-201ENST00000616896 331 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 MIR6839-201ENST00000620425 113 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC104985.2-201ENST00000620598 500 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AL359880.1-201ENST00000621879 266 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.35□□□□□ -1.55
COL6A2P12110 MIR6863-201ENST00000636112 90 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 CASC19-264ENST00000641912 1184 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.35□□□□□ -1.55
COL6A2P12110 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.35□□□□□ -1.55
COL6A2P12110 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.35□□□□□ -1.55
COL6A2P12110 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
COL6A2P12110 AC117529.2-201ENST00000512159 2068 ntBASIC5.35□□□□□ -1.55
COL6A2P12110 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
COL6A2P12110 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL6A2P12110 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
COL6A2P12110 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
COL6A2P12110 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 AC104623.2-202ENST00000623477 4002 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 OR4K15-201ENST00000305051 1216 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.34□□□□□ -1.55
COL6A2P12110 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.34□□□□□ -1.55
COL6A2P12110 RNU6-769P-201ENST00000384407 104 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 RN7SKP285-201ENST00000410137 318 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 AC211486.3-201ENST00000412694 621 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.34□□□□□ -1.55
COL6A2P12110 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.34□□□□□ -1.55
COL6A2P12110 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.34□□□□□ -1.55
COL6A2P12110 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.34□□□□□ -1.55
COL6A2P12110 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms