Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CD28P10747 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CD28P10747 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3□□□□□ -1.93
CD28P10747 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CD28P10747 RNU6-883P-201ENST00000384597 107 ntBASIC3□□□□□ -1.93
CD28P10747 ZNF603P-201ENST00000405613 487 ntBASIC3□□□□□ -1.93
CD28P10747 SNORA11.1-201ENST00000408133 129 ntBASIC3□□□□□ -1.93
CD28P10747 LINC01347-201ENST00000417964 355 ntBASIC3□□□□□ -1.93
CD28P10747 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3□□□□□ -1.93
CD28P10747 AL035423.1-201ENST00000420331 213 ntBASIC3□□□□□ -1.93
CD28P10747 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3□□□□□ -1.93
CD28P10747 Z74696.2-201ENST00000436514 498 ntBASIC3□□□□□ -1.93
CD28P10747 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3□□□□□ -1.93
CD28P10747 HMGB1P37-201ENST00000439613 609 ntBASIC3□□□□□ -1.93
CD28P10747 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3□□□□□ -1.93
CD28P10747 VN1R25P-201ENST00000443385 738 ntBASIC3□□□□□ -1.93
CD28P10747 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3□□□□□ -1.93
CD28P10747 AL513343.1-201ENST00000451818 792 ntBASIC3□□□□□ -1.93
CD28P10747 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3□□□□□ -1.93
CD28P10747 VN1R40P-201ENST00000455196 941 ntBASIC3□□□□□ -1.93
CD28P10747 RPS26P15-201ENST00000488067 348 ntBASIC3□□□□□ -1.93
CD28P10747 UBE2CP3-201ENST00000502715 450 ntBASIC3□□□□□ -1.93
CD28P10747 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3□□□□□ -1.93
CD28P10747 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CD28P10747 IGKV2-38-201ENST00000517443 247 ntBASIC3□□□□□ -1.93
CD28P10747 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3□□□□□ -1.93
CD28P10747 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3□□□□□ -1.93
CD28P10747 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3□□□□□ -1.93
CD28P10747 OR4A2P-201ENST00000527276 913 ntBASIC3□□□□□ -1.93
CD28P10747 OR8I1P-201ENST00000529291 931 ntBASIC3□□□□□ -1.93
CD28P10747 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3□□□□□ -1.93
CD28P10747 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3□□□□□ -1.93
CD28P10747 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3□□□□□ -1.93
CD28P10747 AC005242.1-201ENST00000585658 438 ntBASIC3□□□□□ -1.93
CD28P10747 AC128687.2-201ENST00000609657 566 ntBASIC3□□□□□ -1.93
CD28P10747 AL391261.4-201ENST00000616012 481 ntBASIC3□□□□□ -1.93
CD28P10747 AC020978.9-201ENST00000624380 1141 ntBASIC3□□□□□ -1.93
CD28P10747 AL773545.4-201ENST00000637262 310 ntBASIC3□□□□□ -1.93
CD28P10747 AL513478.4-201ENST00000641636 310 ntBASIC3□□□□□ -1.93
CD28P10747 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CD28P10747 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3□□□□□ -1.93
CD28P10747 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3□□□□□ -1.93
CD28P10747 AC018555.1-201ENST00000567548 1980 ntBASIC3□□□□□ -1.93
CD28P10747 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3□□□□□ -1.93
CD28P10747 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD28P10747 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD28P10747 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.99□□□□□ -1.93
CD28P10747 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
CD28P10747 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CD28P10747 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CD28P10747 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
CD28P10747 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
CD28P10747 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CD28P10747 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.99□□□□□ -1.93
CD28P10747 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.99□□□□□ -1.93
CD28P10747 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CD28P10747 RNA5SP119-201ENST00000362715 117 ntBASIC2.99□□□□□ -1.93
CD28P10747 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.99□□□□□ -1.93
CD28P10747 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.99□□□□□ -1.93
CD28P10747 MIR3074-201ENST00000384885 81 ntBASIC2.99□□□□□ -1.93
CD28P10747 RNA5SP239-201ENST00000410218 129 ntBASIC2.99□□□□□ -1.93
CD28P10747 AC068533.1-201ENST00000418542 415 ntBASIC2.99□□□□□ -1.93
CD28P10747 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.99□□□□□ -1.93
CD28P10747 AC083863.1-201ENST00000438811 231 ntBASIC2.99□□□□□ -1.93
CD28P10747 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.99□□□□□ -1.93
CD28P10747 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.99□□□□□ -1.93
CD28P10747 TPRKBP1-201ENST00000456243 481 ntBASIC2.99□□□□□ -1.93
CD28P10747 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.99□□□□□ -1.93
CD28P10747 AL133162.1-201ENST00000463228 453 ntBASIC2.99□□□□□ -1.93
CD28P10747 CABYRP1-201ENST00000465493 1045 ntBASIC2.99□□□□□ -1.93
CD28P10747 RPL23AP71-201ENST00000470966 469 ntBASIC2.99□□□□□ -1.93
CD28P10747 AC093663.2-201ENST00000484625 313 ntBASIC2.99□□□□□ -1.93
CD28P10747 OR9N1P-202ENST00000494289 481 ntBASIC2.99□□□□□ -1.93
CD28P10747 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.99□□□□□ -1.93
CD28P10747 SNORA31.13-201ENST00000516624 135 ntBASIC2.99□□□□□ -1.93
CD28P10747 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC2.99□□□□□ -1.93
CD28P10747 IGHV3-32-201ENST00000519182 355 ntBASIC2.99□□□□□ -1.93
CD28P10747 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.99□□□□□ -1.93
CD28P10747 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.99□□□□□ -1.93
CD28P10747 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.99□□□□□ -1.93
CD28P10747 OR4U1P-201ENST00000554958 912 ntBASIC2.99□□□□□ -1.93
CD28P10747 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.99□□□□□ -1.93
CD28P10747 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.99□□□□□ -1.93
CD28P10747 AC115085.1-201ENST00000588924 229 ntBASIC2.99□□□□□ -1.93
CD28P10747 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.99□□□□□ -1.93
CD28P10747 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.99□□□□□ -1.93
CD28P10747 AP003117.1-201ENST00000602771 554 ntBASIC2.99□□□□□ -1.93
CD28P10747 AL096803.3-201ENST00000609032 532 ntBASIC2.99□□□□□ -1.93
CD28P10747 AC006946.3-201ENST00000609791 756 ntBASIC2.99□□□□□ -1.93
CD28P10747 AP000255.1-201ENST00000610276 676 ntBASIC2.99□□□□□ -1.93
CD28P10747 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.99□□□□□ -1.93
CD28P10747 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
CD28P10747 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD28P10747 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.99□□□□□ -1.93
CD28P10747 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD28P10747 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD28P10747 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
CD28P10747 AC083899.2-201ENST00000423285 1376 ntBASIC2.99□□□□□ -1.93
CD28P10747 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CD28P10747 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms