Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.42□□□□□ -1.86
UBCP0CG48 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.42□□□□□ -1.86
UBCP0CG48 ZNF192P1-203ENST00000565888 810 ntBASIC3.42□□□□□ -1.86
UBCP0CG48 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.42□□□□□ -1.86
UBCP0CG48 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.42□□□□□ -1.86
UBCP0CG48 AC090312.2-201ENST00000582687 378 ntBASIC3.42□□□□□ -1.86
UBCP0CG48 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.42□□□□□ -1.86
UBCP0CG48 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.42□□□□□ -1.86
UBCP0CG48 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.42□□□□□ -1.86
UBCP0CG48 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.42□□□□□ -1.86
UBCP0CG48 AL592295.2-201ENST00000612578 206 ntBASIC3.42□□□□□ -1.86
UBCP0CG48 AC114781.5-201ENST00000615297 108 ntBASIC3.42□□□□□ -1.86
UBCP0CG48 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
UBCP0CG48 AP000346.3-201ENST00000622821 210 ntBASIC3.42□□□□□ -1.86
UBCP0CG48 AC104820.1-201ENST00000624183 307 ntBASIC3.42□□□□□ -1.86
UBCP0CG48 AC091905.1-201ENST00000624400 311 ntBASIC3.42□□□□□ -1.86
UBCP0CG48 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBCP0CG48 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBCP0CG48 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBCP0CG48 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.42□□□□□ -1.86
UBCP0CG48 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.42□□□□□ -1.86
UBCP0CG48 AP002001.2-201ENST00000529025 1469 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 AP001148.1-201ENST00000624124 2359 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UBCP0CG48 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.41□□□□□ -1.86
UBCP0CG48 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBCP0CG48 AL592494.2-201ENST00000425455 1548 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UBCP0CG48 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBCP0CG48 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
UBCP0CG48 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBCP0CG48 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.41□□□□□ -1.86
UBCP0CG48 AC245028.1-201ENST00000423259 256 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 COX6CP15-201ENST00000426313 211 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 BRWD1P3-201ENST00000428816 390 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 MTND4LP14-201ENST00000429447 288 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 MRPL50P1-201ENST00000431951 384 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.41□□□□□ -1.86
UBCP0CG48 UBE2CP3-201ENST00000502715 450 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.41□□□□□ -1.86
UBCP0CG48 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.41□□□□□ -1.86
UBCP0CG48 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.41□□□□□ -1.86
UBCP0CG48 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.41□□□□□ -1.86
UBCP0CG48 HIGD1AP3-201ENST00000515857 278 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 C1DP5-201ENST00000525775 383 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.41□□□□□ -1.86
UBCP0CG48 OR4A12P-201ENST00000530847 918 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.41□□□□□ -1.86
UBCP0CG48 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UBCP0CG48 AC090877.1-201ENST00000561418 344 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.41□□□□□ -1.86
UBCP0CG48 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UBCP0CG48 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.41□□□□□ -1.86
UBCP0CG48 AC008121.2-201ENST00000614647 523 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 AC090617.9-201ENST00000623751 147 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 AC020978.9-201ENST00000624380 1141 ntBASIC3.41□□□□□ -1.86
UBCP0CG48 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.41□□□□□ -1.86
UBCP0CG48 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
UBCP0CG48 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBCP0CG48 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UBCP0CG48 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
UBCP0CG48 AC006504.1-201ENST00000562493 3666 ntBASIC3.4□□□□□ -1.86
UBCP0CG48 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
UBCP0CG48 ASNSP1-204ENST00000641977 1664 ntBASIC3.4□□□□□ -1.86
UBCP0CG48 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
UBCP0CG48 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
UBCP0CG48 SNORD51.1-201ENST00000365405 77 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 U1.1-201ENST00000384101 164 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
UBCP0CG48 RPL37P18-201ENST00000411602 243 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.4□□□□□ -1.87
UBCP0CG48 EI24P1-201ENST00000416584 867 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AC023128.2-201ENST00000420880 1223 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AC009480.2-201ENST00000422916 432 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 MTND4P24-201ENST00000424002 397 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.4□□□□□ -1.87
UBCP0CG48 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.4□□□□□ -1.87
UBCP0CG48 AC068287.1-201ENST00000430283 295 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.4□□□□□ -1.87
UBCP0CG48 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.4□□□□□ -1.87
UBCP0CG48 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.4□□□□□ -1.87
UBCP0CG48 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.4□□□□□ -1.87
UBCP0CG48 RPS11P1-201ENST00000451072 473 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 RPL23AP14-201ENST00000468281 468 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
UBCP0CG48 RPL31P13-201ENST00000484151 370 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 RPS23P1-201ENST00000491662 432 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.4□□□□□ -1.87
UBCP0CG48 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.4□□□□□ -1.87
UBCP0CG48 RN7SKP209-201ENST00000516888 304 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AC087369.1-201ENST00000520775 996 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 SUMO2P20-201ENST00000520803 283 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.4□□□□□ -1.87
UBCP0CG48 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.4□□□□□ -1.87
UBCP0CG48 CIR1P1-201ENST00000524055 1133 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.4□□□□□ -1.87
UBCP0CG48 MTND5P21-201ENST00000531961 522 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AL442163.2-201ENST00000553912 710 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 SERPINE4P-201ENST00000554978 281 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms