Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC6P09630 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
HOXC6P09630 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC6P09630 FAM91A3P-201ENST00000456826 2544 ntBASIC4.71□□□□□ -1.66
HOXC6P09630 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC6P09630 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC6P09630 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC6P09630 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC6P09630 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC6P09630 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC6P09630 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HOXC6P09630 SNORA60-201ENST00000362396 134 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 RNA5SP124-201ENST00000362739 110 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 SNORD46.1-201ENST00000364139 104 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC6P09630 SNORD66.1-201ENST00000391230 76 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC6P09630 HMGB1P13-201ENST00000406019 642 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 RNU4-6P-201ENST00000410804 122 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 HSPE1P12-201ENST00000412576 301 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 SETP15-201ENST00000412724 337 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 RAB9AP3-201ENST00000412737 573 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AL008987.1-201ENST00000415528 237 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 MTND4P3-201ENST00000417829 541 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC6P09630 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC6P09630 AL589880.1-201ENST00000448271 287 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 RAB9AP1-201ENST00000449393 573 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 ART2BP-201ENST00000453501 499 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC6P09630 RPL7P15-201ENST00000461190 712 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 RPS4XP12-201ENST00000461747 709 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 RPL7P1-201ENST00000468161 747 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 RPL7P9-201ENST00000468715 747 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 GAPDHP36-201ENST00000480688 918 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AC012158.1-204ENST00000483430 465 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AC011037.1-201ENST00000483964 558 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AC107398.1-201ENST00000486904 505 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AC110792.1-201ENST00000491826 472 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 DEFB109F-201ENST00000491870 277 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AC026414.1-201ENST00000504046 698 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AC118282.2-201ENST00000508739 374 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC6P09630 TRMT10BP1-201ENST00000519377 943 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 MTCO2P15-201ENST00000532655 656 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC6P09630 RPL21P7-201ENST00000557463 483 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AC023813.2-201ENST00000564321 469 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.7□□□□□ -1.66
HOXC6P09630 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.7□□□□□ -1.66
HOXC6P09630 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC6P09630 AP005262.1-201ENST00000582646 997 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC6P09630 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC6P09630 Z99497.2-201ENST00000603634 310 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AL035411.2-201ENST00000604022 421 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AC096586.1-201ENST00000610267 561 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 AL121772.2-201ENST00000614331 297 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC6P09630 AP002782.1-201ENST00000623107 614 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC6P09630 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC6P09630 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC6P09630 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC6P09630 ZNF849P-201ENST00000594711 1566 ntBASIC4.7□□□□□ -1.66
HOXC6P09630 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HOXC6P09630 MAPK10-372ENST00000641954 3413 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
HOXC6P09630 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC6P09630 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC6P09630 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC6P09630 SNORA63.1-201ENST00000362493 131 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 RNA5SP119-201ENST00000362715 117 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 RNA5SP387-201ENST00000364226 106 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HOXC6P09630 SNORD116-1-201ENST00000384335 95 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 RNU6-729P-201ENST00000384399 107 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 AC233289.1-201ENST00000403700 508 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 SFR1P1-201ENST00000403720 688 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC6P09630 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC6P09630 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC6P09630 NANOGP2-201ENST00000435391 727 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC6P09630 KATNBL1P3-201ENST00000443475 909 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 AC079203.1-201ENST00000487972 404 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC6P09630 RNU6-513P-201ENST00000516104 104 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC6P09630 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC6P09630 AC104417.1-201ENST00000523974 751 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC6P09630 PHBP17-201ENST00000528576 541 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 AL356057.1-201ENST00000533798 831 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 CCNG2P1-201ENST00000549521 1000 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 AC125611.1-201ENST00000549563 229 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 SETP1-201ENST00000556014 845 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 AC120057.2-201ENST00000571520 271 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 PIGPP4-201ENST00000584447 307 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms