Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 DDX6P1-205ENST00000441966 1436 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AL133412.1-201ENST00000380194 2992 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 RN7SKP111-201ENST00000410349 271 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 BX842559.1-201ENST00000419615 532 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AL513174.1-201ENST00000423182 629 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 RPL23AP82-202ENST00000427528 469 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 RPL37P1-201ENST00000432310 284 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 CENPBD1P1-201ENST00000464061 469 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 PLGLA-201ENST00000465668 449 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 ARL2BPP6-201ENST00000512757 439 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 RN7SKP157-201ENST00000516174 282 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AC107934.2-201ENST00000518653 310 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 SOD1P3-201ENST00000518682 454 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 NDUFB9P3-201ENST00000521269 501 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 NPM1P35-201ENST00000533043 868 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AC007424.1-203ENST00000554613 687 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AC006557.5-201ENST00000603126 811 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AL034351.1-201ENST00000605288 668 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AC034236.3-201ENST00000605999 461 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AC015802.5-201ENST00000607478 399 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 uc_338.32-201ENST00000615087 172 ntBASIC3.45□□□□□ -1.86
HLA-DQB2P05538 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
HLA-DQB2P05538 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC114546.3-201ENST00000623582 1734 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC007529.1-201ENST00000418574 2178 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 RNU1-87P-201ENST00000363727 170 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 OR6K3-202ENST00000368146 996 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AP002088.1-201ENST00000382740 395 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 RNA5SP239-201ENST00000410218 129 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC126124.2-201ENST00000413542 321 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 HSFY4P-201ENST00000415994 1181 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC093698.1-201ENST00000423843 571 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC008264.1-201ENST00000447612 367 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 RPL12P26-201ENST00000452430 487 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AP002812.1-201ENST00000495378 474 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC112198.1-201ENST00000505369 1220 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.44□□□□□ -1.86
HLA-DQB2P05538 OR4R3P-201ENST00000525084 838 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 Z82195.1-201ENST00000604558 398 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 U7.8-201ENST00000619968 63 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC110801.1-201ENST00000623590 212 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQB2P05538 AC008725.1-201ENST00000605123 2263 ntBASIC3.44□□□□□ -1.86
HLA-DQB2P05538 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 MIR184-201ENST00000384962 84 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 MIR1183-201ENST00000408856 89 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 RNU6-55P-201ENST00000411092 107 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 RNU6-954P-201ENST00000411355 107 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 BX323014.1-201ENST00000412876 237 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AL356968.1-201ENST00000416622 474 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 PDSS1P2-201ENST00000449397 678 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC008155.2-201ENST00000464337 397 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 RPL23AP67-201ENST00000465341 474 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AP000926.1-201ENST00000479573 241 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC092045.1-201ENST00000495716 1231 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 FCF1P8-201ENST00000510322 597 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms