Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PROM1O43490 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PROM1O43490 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
PROM1O43490 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
PROM1O43490 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
PROM1O43490 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.86□□□□□ -1.63
PROM1O43490 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PROM1O43490 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PROM1O43490 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PROM1O43490 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.85□□□□□ -1.63
PROM1O43490 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PROM1O43490 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PROM1O43490 OR10J6P-201ENST00000289731 930 ntBASIC4.85□□□□□ -1.63
PROM1O43490 Y_RNA.302-201ENST00000364997 102 ntBASIC4.85□□□□□ -1.63
PROM1O43490 RNU6-619P-201ENST00000365146 108 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.85□□□□□ -1.63
PROM1O43490 RNU6-1042P-201ENST00000384204 107 ntBASIC4.85□□□□□ -1.63
PROM1O43490 RN7SKP126-201ENST00000411143 300 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC007738.1-201ENST00000413892 348 ntBASIC4.85□□□□□ -1.63
PROM1O43490 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.85□□□□□ -1.63
PROM1O43490 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.85□□□□□ -1.63
PROM1O43490 AC073069.1-201ENST00000428657 441 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AL031667.1-201ENST00000440222 725 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC092809.1-201ENST00000441469 474 ntBASIC4.85□□□□□ -1.63
PROM1O43490 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.85□□□□□ -1.63
PROM1O43490 COX6CP12-201ENST00000446748 202 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.85□□□□□ -1.63
PROM1O43490 TPT1P7-201ENST00000458300 517 ntBASIC4.85□□□□□ -1.63
PROM1O43490 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.85□□□□□ -1.63
PROM1O43490 RPS18P6-201ENST00000476880 458 ntBASIC4.85□□□□□ -1.63
PROM1O43490 MTND6P6-201ENST00000478031 263 ntBASIC4.85□□□□□ -1.63
PROM1O43490 NIFKP7-201ENST00000503365 834 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.85□□□□□ -1.63
PROM1O43490 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.85□□□□□ -1.63
PROM1O43490 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.85□□□□□ -1.63
PROM1O43490 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.85□□□□□ -1.63
PROM1O43490 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.85□□□□□ -1.63
PROM1O43490 PGBD4P4-201ENST00000509673 613 ntBASIC4.85□□□□□ -1.63
PROM1O43490 TCP11X3P-202ENST00000514289 1254 ntBASIC4.85□□□□□ -1.63
PROM1O43490 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.85□□□□□ -1.63
PROM1O43490 BNIP3P1-201ENST00000547295 580 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC084757.1-201ENST00000559987 490 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.85□□□□□ -1.63
PROM1O43490 AC136619.2-201ENST00000563361 631 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.85□□□□□ -1.63
PROM1O43490 MIR4716-201ENST00000579628 84 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC090312.1-201ENST00000580637 348 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.85□□□□□ -1.63
PROM1O43490 VN1R92P-201ENST00000598511 928 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.85□□□□□ -1.63
PROM1O43490 AC005332.6-201ENST00000613178 446 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC026368.1-201ENST00000614934 690 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC100827.5-201ENST00000615883 426 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AL121873.1-201ENST00000616013 524 ntBASIC4.85□□□□□ -1.63
PROM1O43490 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC124312.6-202ENST00000623624 418 ntBASIC4.85□□□□□ -1.63
PROM1O43490 AC016717.3-201ENST00000624730 554 ntBASIC4.85□□□□□ -1.63
PROM1O43490 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 ATE1-AS1-202ENST00000636460 506 ntBASIC4.85□□□□□ -1.63
PROM1O43490 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
PROM1O43490 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.85□□□□□ -1.63
PROM1O43490 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.85□□□□□ -1.63
PROM1O43490 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.85□□□□□ -1.63
PROM1O43490 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PROM1O43490 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PROM1O43490 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PROM1O43490 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PROM1O43490 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.84□□□□□ -1.63
PROM1O43490 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PROM1O43490 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.84□□□□□ -1.63
PROM1O43490 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.84□□□□□ -1.63
PROM1O43490 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PROM1O43490 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.84□□□□□ -1.63
PROM1O43490 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PROM1O43490 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PROM1O43490 AC107982.1-201ENST00000507171 1300 ntBASIC4.84□□□□□ -1.63
PROM1O43490 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PROM1O43490 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PROM1O43490 SNORA75-201ENST00000384158 137 ntBASIC4.84□□□□□ -1.63
PROM1O43490 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PROM1O43490 AL035079.1-201ENST00000405210 287 ntBASIC4.84□□□□□ -1.63
PROM1O43490 AL590290.1-201ENST00000405336 380 ntBASIC4.84□□□□□ -1.63
PROM1O43490 MIR1284-201ENST00000408337 120 ntBASIC4.84□□□□□ -1.63
PROM1O43490 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.84□□□□□ -1.63
PROM1O43490 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.84□□□□□ -1.63
PROM1O43490 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.84□□□□□ -1.63
PROM1O43490 AC093698.1-201ENST00000423843 571 ntBASIC4.84□□□□□ -1.63
PROM1O43490 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.84□□□□□ -1.63
PROM1O43490 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.84□□□□□ -1.63
PROM1O43490 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms