Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.88□□□□□ -1.63
PHGDHO43175 AC019206.1-201ENST00000621938 425 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 U6.101-201ENST00000637707 76 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.88□□□□□ -1.63
PHGDHO43175 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PHGDHO43175 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PHGDHO43175 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PHGDHO43175 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
PHGDHO43175 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PHGDHO43175 DDX43P2-201ENST00000604753 1354 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 OR4G11P-202ENST00000642116 1414 ntBASIC4.88□□□□□ -1.63
PHGDHO43175 MTCO1P11-201ENST00000429111 1528 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
PHGDHO43175 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHGDHO43175 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHGDHO43175 SNURFL-201ENST00000309296 343 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 RNU6-462P-201ENST00000362659 105 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 RNU4-24P-201ENST00000364565 139 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 RNA5SP455-201ENST00000365190 119 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.87□□□□□ -1.63
PHGDHO43175 RNU6-723P-201ENST00000383973 107 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PHGDHO43175 AC007066.1-201ENST00000392902 381 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.87□□□□□ -1.63
PHGDHO43175 MIR1286-201ENST00000408112 78 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.87□□□□□ -1.63
PHGDHO43175 AC083875.1-201ENST00000419509 405 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 RPS15AP40-201ENST00000419621 391 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 EIF4HP2-201ENST00000424380 563 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PHGDHO43175 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PHGDHO43175 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.87□□□□□ -1.63
PHGDHO43175 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.87□□□□□ -1.63
PHGDHO43175 OR7E125P-201ENST00000443450 846 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 TAF9P1-201ENST00000445421 515 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.87□□□□□ -1.63
PHGDHO43175 AL591623.2-201ENST00000449978 222 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 TAF9P2-201ENST00000454958 515 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 TPTE2P5-203ENST00000458118 728 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 MEMO1P3-201ENST00000459811 302 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC018638.3-201ENST00000461273 132 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 RN7SL517P-201ENST00000462240 305 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 COPS8P2-201ENST00000473228 627 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.87□□□□□ -1.63
PHGDHO43175 RPS18P6-201ENST00000476880 458 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC109486.1-201ENST00000486833 374 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 RPS4XP15-201ENST00000489210 795 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.87□□□□□ -1.63
PHGDHO43175 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.87□□□□□ -1.63
PHGDHO43175 COX6B1P5-201ENST00000509843 249 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.87□□□□□ -1.63
PHGDHO43175 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.87□□□□□ -1.63
PHGDHO43175 RPL12P22-201ENST00000519073 490 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.87□□□□□ -1.63
PHGDHO43175 AC087276.1-201ENST00000529659 480 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC092851.1-201ENST00000535964 478 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC007115.1-201ENST00000546853 234 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.87□□□□□ -1.63
PHGDHO43175 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.87□□□□□ -1.63
PHGDHO43175 AC024909.2-201ENST00000553035 286 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.87□□□□□ -1.63
PHGDHO43175 AC084757.1-201ENST00000559987 490 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 MAGOH2P-202ENST00000584384 429 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.87□□□□□ -1.63
PHGDHO43175 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.87□□□□□ -1.63
PHGDHO43175 U73023.1-201ENST00000603134 700 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 TAS2R6P-201ENST00000605022 826 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC113194.1-201ENST00000606037 500 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AL159169.3-201ENST00000608871 561 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.87□□□□□ -1.63
PHGDHO43175 MIR6729-201ENST00000618194 65 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 AC006927.3-201ENST00000638789 384 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 LINC01739-205ENST00000641890 573 ntBASIC4.87□□□□□ -1.63
PHGDHO43175 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.87□□□□□ -1.63
PHGDHO43175 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PHGDHO43175 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHGDHO43175 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.87□□□□□ -1.63
PHGDHO43175 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PHGDHO43175 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHGDHO43175 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PHGDHO43175 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.87□□□□□ -1.63
PHGDHO43175 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.87□□□□□ -1.63
PHGDHO43175 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PHGDHO43175 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHGDHO43175 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PHGDHO43175 RNU6-433P-201ENST00000363216 104 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PHGDHO43175 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHGDHO43175 AC016769.3-201ENST00000396562 315 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AL391361.1-201ENST00000405580 489 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 OR8G2P-201ENST00000412796 908 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.86□□□□□ -1.63
PHGDHO43175 AF186996.5-201ENST00000418098 904 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.86□□□□□ -1.63
PHGDHO43175 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.86□□□□□ -1.63
PHGDHO43175 AC079355.1-201ENST00000421770 223 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PHGDHO43175 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.86□□□□□ -1.63
PHGDHO43175 AC073648.4-201ENST00000442655 781 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms