Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 IFNNP1-201ENST00000429219 553 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AC010881.1-201ENST00000433830 235 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC188H7C350 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC188H7C350 ARL2BPP10-201ENST00000446487 531 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AL500522.2-201ENST00000448562 343 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 RPL35P6-201ENST00000490024 372 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 RPL29P14-201ENST00000495837 428 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC188H7C350 AC008837.1-201ENST00000511513 412 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AC005798.1-201ENST00000513715 387 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 RNA5SP519-201ENST00000516480 119 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 MIR2114-201ENST00000516645 80 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC188H7C350 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC188H7C350 AP001207.1-201ENST00000524051 481 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC188H7C350 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC188H7C350 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC188H7C350 YWHAZP1-201ENST00000556286 722 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC188H7C350 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
CCDC188H7C350 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC188H7C350 AC114878.2-201ENST00000604863 1251 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC188H7C350 AL158050.2-201ENST00000605336 568 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AP003117.2-201ENST00000606010 545 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AC026368.1-201ENST00000614934 690 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AC103798.2-201ENST00000624292 632 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC188H7C350 FAM157B-203ENST00000639350 358 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC188H7C350 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC188H7C350 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC188H7C350 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC188H7C350 AL031985.3-201ENST00000565390 2449 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC188H7C350 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC188H7C350 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC188H7C350 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC188H7C350 OR1L1-202ENST00000373686 1083 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 RNU6-1279P-201ENST00000383917 103 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 HMGN2P8-201ENST00000391458 268 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 HSPD1P16-201ENST00000402302 394 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 RPS12P23-201ENST00000419579 400 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 CHIAP3-201ENST00000423668 1133 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC188H7C350 RPL36P19-201ENST00000430744 301 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC188H7C350 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC188H7C350 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC188H7C350 RNA5SP246-201ENST00000458909 119 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC188H7C350 RN7SL93P-201ENST00000463035 293 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 RPL37P6-202ENST00000464216 403 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 AC083982.1-201ENST00000485679 344 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 RN7SL810P-201ENST00000493031 276 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 SNX5P1-201ENST00000505757 1041 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 AC118282.2-201ENST00000508739 374 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 KCTD9P2-201ENST00000512203 1013 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 AC026726.1-201ENST00000512859 601 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 RN7SKP234-201ENST00000517173 224 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC188H7C350 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
CCDC188H7C350 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC188H7C350 HIGD1AP5-201ENST00000529959 259 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 LRRC6P1-201ENST00000532188 885 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC188H7C350 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC188H7C350 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC188H7C350 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CCDC188H7C350 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC188H7C350 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC188H7C350 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC188H7C350 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC188H7C350 AC022655.2-201ENST00000577280 318 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC188H7C350 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC188H7C350 AC090330.1-201ENST00000588646 764 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC188H7C350 LLPHP1-201ENST00000603571 367 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 AL451044.1-201ENST00000604867 238 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 AL139022.2-201ENST00000606934 443 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC188H7C350 AP000238.1-201ENST00000608759 426 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC188H7C350 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC188H7C350 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC188H7C350 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC188H7C350 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC188H7C350 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CCDC188H7C350 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC188H7C350 AC111188.2-201ENST00000529697 1387 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC188H7C350 AL158163.1-201ENST00000603915 1649 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 CASC19-261ENST00000641853 1638 ntBASIC4.24□□□□□ -1.73
CCDC188H7C350 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 LINC00561-201ENST00000565815 2738 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms