Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 SUMO2P3-201ENST00000438311 288 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 GAPDHP58-201ENST00000438477 1006 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AL031667.1-201ENST00000440222 725 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 NOP56P2-201ENST00000447491 769 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 YWHAEP1-201ENST00000453697 763 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC013828.1-201ENST00000481845 158 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC058823.1-201ENST00000485315 474 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 RNU6-202P-201ENST00000515998 96 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 SULT1C2P2-201ENST00000562517 294 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC005771.1-201ENST00000585581 349 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC009597.2-201ENST00000604659 592 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC126118.1-201ENST00000607744 628 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AC116563.2-201ENST00000624751 535 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 OR52B5P-202ENST00000641118 1110 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AL031985.3-201ENST00000565390 2449 ntBASIC5.57□□□□□ -1.52
CCDC66A2RUB6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC66A2RUB6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC091046.3-201ENST00000631455 1574 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 FABP7P2-201ENST00000429946 379 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC126182.1-201ENST00000478134 357 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AP000797.1-201ENST00000478870 387 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 OR4G11P-201ENST00000492842 939 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 RNU6-488P-201ENST00000515918 99 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC010547.6-201ENST00000571789 193 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC008687.2-201ENST00000597865 520 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC015871.2-201ENST00000603605 948 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AL162431.4-201ENST00000604674 411 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC011626.1-201ENST00000604710 562 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AP002360.4-201ENST00000606980 481 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC023813.4-201ENST00000607580 580 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AP000894.4-201ENST00000610185 483 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC231657.1-201ENST00000624313 397 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 AC006210.2-201ENST00000367074 1545 ntBASIC5.56□□□□□ -1.52
CCDC66A2RUB6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC66A2RUB6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms