Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 SNORA33.2-201ENST00000365413 134 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 BTBD10P2-201ENST00000404779 676 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 GAPDHP42-201ENST00000406848 981 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 AC233981.1-201ENST00000423224 461 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 RPS3AP38-201ENST00000435889 763 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 AC092967.1-201ENST00000449016 481 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 PPP1R2P5-201ENST00000457256 603 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 RNU7-63P-201ENST00000459054 62 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 MTND4P17-201ENST00000470444 350 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 RPS15AP17-201ENST00000470598 390 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 RPS4XP18-201ENST00000495480 763 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 EIF4EP3-201ENST00000498782 656 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 AC093677.1-201ENST00000514414 678 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 RNU6-1046P-201ENST00000516538 107 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 AC016925.2-201ENST00000605108 242 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 AL139099.4-201ENST00000614802 114 ntBASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.2□□□□□ -1.26
ZC3H4Q9UPT8 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 RIOK3P1-201ENST00000418778 1528 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AC025470.1-201ENST00000510053 2032 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 OR5P1P-201ENST00000299512 925 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 RNA5SP478-201ENST00000364657 115 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 RNU6-43P-201ENST00000384302 107 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 RNU2-62P-201ENST00000410868 191 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 NMD3P2-201ENST00000421815 761 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AC119618.1-201ENST00000434191 222 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 RPS7P3-201ENST00000443360 580 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 FRG2FP-204ENST00000453982 852 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AZGP1P2-201ENST00000454506 345 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AC233702.1-201ENST00000482905 502 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 RNA5SP116-201ENST00000516132 98 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 RNU6-714P-201ENST00000516963 103 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AP000859.1-201ENST00000525536 307 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 PMS2P3-207ENST00000529061 717 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 MIR3167-201ENST00000579623 85 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 MIR4260-201ENST00000583107 67 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 BBIP1P1-201ENST00000602999 279 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AC006006.1-201ENST00000603082 144 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AC121334.2-201ENST00000605387 271 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 OR10AB1P-201ENST00000609613 938 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 AL354950.2-201ENST00000617939 290 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 OR4G1P-203ENST00000641984 1631 ntBASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.19□□□□□ -1.26
ZC3H4Q9UPT8 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms