Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 AC103843.2-201ENST00000530523 682 ntBASIC8.45□□□□□ -1.06
PHF8Q9UPP1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 AL353997.4-201ENST00000586196 166 ntBASIC8.45□□□□□ -1.06
PHF8Q9UPP1 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC8.45□□□□□ -1.06
PHF8Q9UPP1 PISRT1.1-201ENST00000616930 107 ntBASIC8.45□□□□□ -1.06
PHF8Q9UPP1 AC092608.2-201ENST00000624427 218 ntBASIC8.45□□□□□ -1.06
PHF8Q9UPP1 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 AC009120.2-204ENST00000621548 2032 ntBASIC8.45□□□□□ -1.06
PHF8Q9UPP1 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.45□□□□□ -1.06
PHF8Q9UPP1 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 MIR375-201ENST00000362103 64 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 SNORA43.1-201ENST00000364863 140 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 Y_RNA.496-201ENST00000384444 101 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 SNORA75.6-201ENST00000391318 127 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AL591848.1-201ENST00000413092 322 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AL096829.1-201ENST00000413677 457 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AL121871.1-201ENST00000443413 436 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC002486.2-201ENST00000447806 590 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 HMGN3P1-201ENST00000453847 193 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC010350.1-201ENST00000504908 231 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 Y_RNA.680-201ENST00000516441 93 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 CYCSP22-201ENST00000517555 339 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC068993.1-201ENST00000546724 589 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC091078.2-201ENST00000557145 559 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC018552.3-201ENST00000567416 561 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 MIR4775-201ENST00000581168 75 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC104662.1-201ENST00000604448 511 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AC015967.1-201ENST00000619893 476 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 GUCY1B2-204ENST00000531898 1979 ntBASIC8.44□□□□□ -1.06
PHF8Q9UPP1 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.44□□□□□ -1.06
PHF8Q9UPP1 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 AC123769.2-201ENST00000624332 5984 ntBASIC8.43□□□□□ -1.06
PHF8Q9UPP1 MTND5P7-201ENST00000413558 1798 ntBASIC8.43□□□□□ -1.06
PHF8Q9UPP1 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 RNU6-82P-201ENST00000363970 107 ntBASIC8.43□□□□□ -1.06
PHF8Q9UPP1 RNA5SP132-201ENST00000364725 118 ntBASIC8.43□□□□□ -1.06
PHF8Q9UPP1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 SNORD116-11-201ENST00000383882 92 ntBASIC8.43□□□□□ -1.06
PHF8Q9UPP1 RNU6-713P-201ENST00000384761 107 ntBASIC8.43□□□□□ -1.06
PHF8Q9UPP1 AL391417.1-201ENST00000404100 426 ntBASIC8.43□□□□□ -1.06
PHF8Q9UPP1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC8.43□□□□□ -1.06
PHF8Q9UPP1 PSMA6P3-201ENST00000428242 164 ntBASIC8.43□□□□□ -1.06
PHF8Q9UPP1 HMGB1P9-201ENST00000429856 646 ntBASIC8.43□□□□□ -1.06
PHF8Q9UPP1 AC012075.1-201ENST00000436549 580 ntBASIC8.43□□□□□ -1.06
PHF8Q9UPP1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms