Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL592437.1-201ENST00000443781 492 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 MTND2P22-201ENST00000444325 1033 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 MTCYBP42-201ENST00000444653 1130 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 CASP3P1-201ENST00000446037 609 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC112492.1-201ENST00000449607 712 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 CDC42P1-201ENST00000456658 548 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RPL5P23-201ENST00000496040 868 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC091860.1-201ENST00000505723 432 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 KRT19P6-201ENST00000510983 209 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 TCP11X3P-202ENST00000514289 1254 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 PRELID3BP4-201ENST00000515476 571 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC083923.1-201ENST00000523708 376 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 MTCO2P15-201ENST00000532655 656 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC063950.1-201ENST00000552036 308 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC095057.3-201ENST00000567102 1157 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC015688.2-201ENST00000584523 262 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AL020997.3-201ENST00000602843 359 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC114878.2-201ENST00000604863 1251 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AL139344.1-201ENST00000605228 195 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 MIR432-201ENST00000606207 94 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC007342.8-201ENST00000623278 678 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC145207.9-201ENST00000623802 325 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC010608.2-201ENST00000624830 470 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RNA5SP196-201ENST00000625967 102 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 U6.107-201ENST00000637108 79 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 SEC63P2-201ENST00000503863 1939 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 ASNSP1-201ENST00000518311 1939 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 RNU6-98P-201ENST00000384173 107 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC119751.3-201ENST00000399720 670 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 HMGB1P49-201ENST00000418882 569 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 HIGD1AP4-201ENST00000430194 280 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 MOB1AP1-201ENST00000430903 535 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 RPL7P29-201ENST00000437151 728 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 HMGB3P6-201ENST00000444896 598 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 USP9YP25-201ENST00000457708 443 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 RPL7P48-201ENST00000461513 746 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 RPS7P7-201ENST00000463499 571 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 RN7SL604P-201ENST00000492589 296 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 RN7SKP21-201ENST00000516503 220 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC027104.1-201ENST00000563702 681 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AL132657.2-201ENST00000564417 358 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 MTCO1P40-201ENST00000574371 625 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC021171.1-201ENST00000603137 706 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AL392112.1-201ENST00000605115 829 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC090525.3-201ENST00000605601 189 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AL008729.2-201ENST00000606393 473 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC007349.4-201ENST00000608114 532 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AL031666.3-201ENST00000609320 1006 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 MIR6798-201ENST00000612887 67 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 STMN1P1-201ENST00000617809 440 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC009704.2-201ENST00000618739 483 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC091304.6-201ENST00000619761 202 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 MAPK10-349ENST00000641767 3661 ntBASIC4.45□□□□□ -1.7
SIX4Q9UIU6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SIX4Q9UIU6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AL451142.2-201ENST00000429076 2090 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC092162.3-201ENST00000624511 1624 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX4Q9UIU6 RNU1-87P-201ENST00000363727 170 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 RNU4-92P-201ENST00000363783 136 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 AC019155.1-201ENST00000382242 574 ntBASIC4.44□□□□□ -1.7
SIX4Q9UIU6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms