Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 TAF9BP1-201ENST00000396646 746 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AL136116.1-201ENST00000403591 381 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 HMGB1P16-201ENST00000447155 540 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 MIR6715A-201ENST00000615929 79 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AL122125.1-201ENST00000616999 600 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AC006504.1-201ENST00000562493 3666 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 MTND4P26-201ENST00000415971 1359 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 RNU6-283P-201ENST00000364788 107 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 AC100793.4-201ENST00000613683 429 ntBASIC4.3□□□□□ -1.72
SCN11AQ9UI33 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.3□□□□□ -1.72
SCN11AQ9UI33 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 RNU6-301P-201ENST00000384277 107 ntBASIC4.29□□□□□ -1.72
SCN11AQ9UI33 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 AC008065.1-201ENST00000428525 348 ntBASIC4.29□□□□□ -1.72
SCN11AQ9UI33 AC023141.12-201ENST00000512399 199 ntBASIC4.29□□□□□ -1.72
SCN11AQ9UI33 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 AL359715.5-201ENST00000623431 443 ntBASIC4.29□□□□□ -1.72
SCN11AQ9UI33 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.29□□□□□ -1.72
SCN11AQ9UI33 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 UBE2V1P2-201ENST00000397758 440 ntBASIC4.28□□□□□ -1.72
SCN11AQ9UI33 ACTG1P13-201ENST00000486987 1043 ntBASIC4.28□□□□□ -1.72
SCN11AQ9UI33 RPL23AP73-201ENST00000492507 471 ntBASIC4.28□□□□□ -1.72
SCN11AQ9UI33 AC110794.1-201ENST00000505816 425 ntBASIC4.28□□□□□ -1.72
SCN11AQ9UI33 AC113430.1-201ENST00000506872 718 ntBASIC4.28□□□□□ -1.72
SCN11AQ9UI33 AC004024.1-201ENST00000549244 247 ntBASIC4.28□□□□□ -1.72
SCN11AQ9UI33 AC087888.1-201ENST00000550884 1254 ntBASIC4.28□□□□□ -1.72
SCN11AQ9UI33 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 AL157817.1-201ENST00000614264 790 ntBASIC4.28□□□□□ -1.72
SCN11AQ9UI33 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCN11AQ9UI33 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AL139095.1-201ENST00000404326 391 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 S100A11P2-201ENST00000467589 312 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AC006518.1-201ENST00000541449 943 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AC106785.3-201ENST00000564064 847 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AC006557.5-201ENST00000603126 811 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 ATP5A1P2-202ENST00000616464 443 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 RNU1-140P-201ENST00000365040 165 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 SKP1P1-201ENST00000438081 489 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms