Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PPIAP3-201ENST00000450588 505 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AC243772.1-201ENST00000451620 410 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AC069277.2-201ENST00000454211 432 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 RPS4XP2-201ENST00000458402 793 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 EIF2S2P4-201ENST00000461070 984 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 LARP7P4-201ENST00000481075 878 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 RNU6-491P-201ENST00000516099 110 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 MIR2114-201ENST00000516645 80 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AC015911.5-201ENST00000587076 451 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AC092159.4-201ENST00000624944 550 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 OR6C71P-202ENST00000641886 1107 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AC110792.3-201ENST00000595906 1614 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NPC1L1Q9UHC9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AL365440.1-201ENST00000436135 2167 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AL589655.1-201ENST00000405398 482 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC009302.1-201ENST00000417147 390 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC002075.2-201ENST00000425207 252 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 RPS26P47-201ENST00000427219 348 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AP000936.3-201ENST00000438127 255 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 ANP32BP2-201ENST00000454525 545 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC099560.2-201ENST00000457554 255 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 FTH1P24-201ENST00000503502 462 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC026427.2-201ENST00000506228 536 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC103843.2-201ENST00000530523 682 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC131238.1-201ENST00000617135 328 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 AC007342.7-201ENST00000624610 2337 ntBASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPC1L1Q9UHC9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AC007685.1-201ENST00000329806 452 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 RNA5SP72-201ENST00000364442 117 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AL034403.1-201ENST00000399414 885 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AL512430.2-201ENST00000406786 339 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 RPS29P4-201ENST00000414733 161 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AL035551.1-201ENST00000446931 348 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AC023598.1-201ENST00000472521 361 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AC074250.1-201ENST00000511117 192 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 OR8I1P-201ENST00000529291 931 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AL442067.2-201ENST00000614033 363 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AL356274.1-201ENST00000617064 410 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AC243312.2-201ENST00000623340 601 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 SPATA2P1-201ENST00000431223 2055 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AC007656.2-201ENST00000624902 4547 ntBASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
NPC1L1Q9UHC9 AL391417.1-201ENST00000404100 426 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 RPL21P110-201ENST00000433345 446 ntBASIC4.81□□□□□ -1.64
NPC1L1Q9UHC9 RPS20P1-201ENST00000434853 354 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms