Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AL121890.3-201ENST00000618494 516 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 U6.107-201ENST00000637108 79 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 MFSD8-216ENST00000641147 4009 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 CASC19-284ENST00000642142 1868 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 MIR331-201ENST00000362302 94 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 SNORD113.2-201ENST00000364166 89 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 SNORA51.8-201ENST00000384234 132 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AL035419.1-201ENST00000397037 564 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 ATP5F1P4-201ENST00000397288 746 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 RPL37P18-201ENST00000411602 243 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 TCEA1P4-201ENST00000415066 844 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 RPL7AP25-201ENST00000423357 805 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC011998.1-201ENST00000433403 117 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 OR10R1P-201ENST00000441524 1141 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 SEPT14P24-201ENST00000447236 180 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC104687.1-201ENST00000485829 412 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC231760.1-201ENST00000498002 260 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC026414.1-201ENST00000504046 698 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 FTH1P9-201ENST00000513251 355 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC006518.2-201ENST00000542513 940 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC092747.2-201ENST00000545069 983 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC087897.1-201ENST00000550134 156 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 HMGN2P6-201ENST00000551091 273 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 ATP5F1P7-201ENST00000567330 760 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC022968.1-201ENST00000567372 442 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 RPL23AP87-202ENST00000573039 466 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 RN7SL690P-201ENST00000582087 240 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC244505.7-201ENST00000599675 272 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC083899.3-201ENST00000603413 594 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 RPP40P2-201ENST00000603596 712 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC020910.2-201ENST00000603635 610 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC013468.1-201ENST00000608680 598 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC055764.2-201ENST00000610089 670 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC100847.1-201ENST00000611316 481 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC087683.2-201ENST00000611384 326 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 FAM27D1-201ENST00000612308 341 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC109809.1-201ENST00000619665 545 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 AC104985.3-201ENST00000623479 597 ntBASIC3.92□□□□□ -1.78
NDE1Q9NXR1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NDE1Q9NXR1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 CEP170P1-201ENST00000502249 4587 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 CR381670.1-201ENST00000624291 1693 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AL049697.2-201ENST00000403708 294 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 RPL7P27-201ENST00000403775 720 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 RN7SKP106-201ENST00000410832 272 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 RPL30P2-201ENST00000414021 291 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 TAF13P2-201ENST00000416876 286 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 NIPA2P1-201ENST00000426223 976 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 MTATP6P17-201ENST00000431030 672 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NDE1Q9NXR1 AC092013.1-201ENST00000438795 332 ntBASIC3.91□□□□□ -1.78
NDE1Q9NXR1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms