Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 AL359219.2-201ENST00000555184 348 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 MTCYBP13-201ENST00000578634 1093 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 RPL26P30-202ENST00000602923 645 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AL078624.2-201ENST00000605063 554 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AL390877.1-201ENST00000605704 214 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 RPSAP75-201ENST00000605848 301 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 uc_338.5-201ENST00000611839 155 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AC010205.1-201ENST00000616668 449 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 RFPL4AP6-201ENST00000616792 846 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AL356585.4-201ENST00000623078 1229 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 AC091953.2-201ENST00000623979 160 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.72□□□□□ -1.49
SSU72Q9NP77 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSU72Q9NP77 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSU72Q9NP77 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSU72Q9NP77 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSU72Q9NP77 AL049780.3-201ENST00000624612 1583 ntBASIC5.72□□□□□ -1.49
SSU72Q9NP77 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSU72Q9NP77 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.71□□□□□ -1.49
SSU72Q9NP77 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSU72Q9NP77 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSU72Q9NP77 MTCO1P9-201ENST00000505577 1534 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 RNA5SP110-201ENST00000362638 115 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSU72Q9NP77 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSU72Q9NP77 MRPL42P2-201ENST00000403169 426 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC016739.1-201ENST00000405359 345 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 OR4K12P-201ENST00000406538 961 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 RN7SKP29-201ENST00000410957 272 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 AL807761.1-201ENST00000417622 171 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 SRIP2-201ENST00000428470 166 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 TMEM183AP1-205ENST00000432739 290 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AL031663.1-201ENST00000437445 219 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 RPL36AP15-201ENST00000444514 266 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC004980.3-201ENST00000447046 365 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 RPL23AP15-201ENST00000450202 459 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 FGF7P3-201ENST00000454645 303 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 TREML3P-201ENST00000457327 501 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC026410.2-201ENST00000460281 156 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 RN7SL269P-201ENST00000467795 305 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 RN7SL188P-201ENST00000469842 285 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 RPL7P19-201ENST00000469948 618 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC010587.1-201ENST00000505809 469 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC074255.1-201ENST00000511259 501 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 AP003072.2-201ENST00000527756 676 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 HMGB1P42-201ENST00000532126 553 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 PDCD5P1-201ENST00000543528 309 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC093249.1-201ENST00000567049 203 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 MIR5186-201ENST00000577504 120 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC011468.4-201ENST00000603942 409 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC105429.2-201ENST00000610567 517 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC040896.1-201ENST00000613819 479 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 AC073488.3-201ENST00000631611 778 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSU72Q9NP77 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSU72Q9NP77 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSU72Q9NP77 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSU72Q9NP77 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSU72Q9NP77 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSU72Q9NP77 MRE11P1-201ENST00000464884 2127 ntBASIC5.71□□□□□ -1.5
SSU72Q9NP77 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SSU72Q9NP77 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSU72Q9NP77 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSU72Q9NP77 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.7□□□□□ -1.5
SSU72Q9NP77 AC092162.3-201ENST00000624511 1624 ntBASIC5.7□□□□□ -1.5
SSU72Q9NP77 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSU72Q9NP77 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
SSU72Q9NP77 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SSU72Q9NP77 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSU72Q9NP77 MTND4P35-201ENST00000604257 1375 ntBASIC5.7□□□□□ -1.5
SSU72Q9NP77 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms