Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
SCAF1Q9H7N4 DDX50P1-201ENST00000438163 2400 ntBASIC10.93□□□□□ -0.66
SCAF1Q9H7N4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SCAF1Q9H7N4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCAF1Q9H7N4 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
SCAF1Q9H7N4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 RNA5SP258-201ENST00000362750 119 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 Y_RNA.309-201ENST00000365046 111 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 RNVU1-15-201ENST00000384476 165 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 TMEM167AP1-201ENST00000423409 219 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 CYP4F34P-201ENST00000425951 481 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 HMGB1P25-201ENST00000468402 607 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 RN7SL502P-201ENST00000481857 290 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 CREM-242ENST00000490511 469 ntTSL 2 BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 RNU6-1092P-201ENST00000516955 87 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 IGKV2-36-201ENST00000519999 223 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 AC090287.1-201ENST00000578374 291 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 AC006335.3-201ENST00000613408 292 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 AC233981.2-201ENST00000611524 1614 ntBASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCAF1Q9H7N4 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 AL590065.1-201ENST00000603371 4774 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 RNU6-595P-201ENST00000363944 107 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 RN7SKP148-201ENST00000410179 275 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 RN7SKP268-201ENST00000411107 316 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 AC008280.1-201ENST00000418851 412 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 ANKRD54P1-201ENST00000433115 471 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 DAP3P1-201ENST00000441522 278 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 RPL31P11-202ENST00000454082 372 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 RNU7-59P-201ENST00000459101 61 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 AC091982.1-201ENST00000518134 520 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 IGLVI-42-201ENST00000522485 381 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 CYCSP26-201ENST00000534107 320 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 AC007136.1-201ENST00000589141 199 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 7SK.12-201ENST00000612820 244 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 MIR6729-201ENST00000618194 65 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 AC097372.5-201ENST00000623665 376 ntBASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SCAF1Q9H7N4 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 RNA5SP389-201ENST00000362610 115 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 RNA5SP226-201ENST00000362653 115 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 RNU6-270P-201ENST00000364131 105 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 AC113608.1-201ENST00000398740 305 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 RNA5SP111-201ENST00000411386 101 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 MTCO1P5-201ENST00000433573 344 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 AL354714.5-201ENST00000450131 590 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 AL136981.1-203ENST00000451452 3844 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 RN7SL861P-201ENST00000473793 285 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 CYCSP22-201ENST00000517555 339 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 HSPE1P2-201ENST00000554777 306 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 AC005951.2-201ENST00000576282 495 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 AC008962.1-201ENST00000605729 304 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 AL591516.1-201ENST00000611326 274 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 MIR7973-1-201ENST00000614683 76 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 TUG1_3.1-201ENST00000616187 237 ntBASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SCAF1Q9H7N4 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms