Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS11Q9H270 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS11Q9H270 SSXP1-201ENST00000453640 473 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS11Q9H270 KLF3P2-201ENST00000465138 268 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AC146507.1-201ENST00000468335 354 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AC058823.1-201ENST00000485315 474 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 UBA52P3-201ENST00000491303 382 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 MTCO1P35-201ENST00000515270 228 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC124947.2-202ENST00000552735 133 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC011840.5-201ENST00000582125 771 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AL390816.3-201ENST00000604527 1066 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AL162730.1-201ENST00000605734 292 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AC068276.1-201ENST00000605793 379 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC243756.2-201ENST00000618406 463 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AC132068.1-201ENST00000623805 459 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC104260.2-201ENST00000623551 3497 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS11Q9H270 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS11Q9H270 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VPS11Q9H270 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS11Q9H270 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
VPS11Q9H270 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VPS11Q9H270 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 Y_RNA.162-201ENST00000363683 102 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 MT-TL1-201ENST00000386347 75 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 RNU6-1009P-201ENST00000390996 107 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AC005522.1-201ENST00000395416 346 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 HSPA8P15-201ENST00000401676 786 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 RN7SKP247-201ENST00000411094 308 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 RPL21P108-201ENST00000413857 481 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 RPS7P13-201ENST00000413955 498 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 OR6E1P-201ENST00000414424 923 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AC019050.1-201ENST00000418508 492 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 RPL34P3-201ENST00000421454 338 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AL513174.1-201ENST00000423182 629 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 GLRXP1-201ENST00000423261 334 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 SRSF1P1-201ENST00000424058 520 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS11Q9H270 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS11Q9H270 GAPDHP58-201ENST00000438477 1006 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AL450263.2-201ENST00000439400 589 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 RPL23AP76-201ENST00000441860 458 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS11Q9H270 MTND4P19-201ENST00000446659 478 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 BTF3P6-201ENST00000448054 499 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS11Q9H270 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS11Q9H270 MTND6P6-201ENST00000478031 263 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 RPL9P6-201ENST00000492764 598 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS11Q9H270 STMN1P2-201ENST00000508435 439 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 HMGB1P44-201ENST00000508597 572 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
VPS11Q9H270 RPL7L1P13-201ENST00000511702 739 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AC008837.2-201ENST00000513076 418 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS11Q9H270 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AC022832.1-201ENST00000530718 645 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AC107918.3-201ENST00000533272 382 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 TOMM20P1-201ENST00000534518 427 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AC005341.1-201ENST00000571086 708 ntBASIC5.28□□□□□ -1.56
VPS11Q9H270 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.28□□□□□ -1.56
VPS11Q9H270 AC020910.2-201ENST00000603635 610 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms