Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX18Q96RF0 RNA5SP507-201ENST00000363603 121 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 Y_RNA.302-201ENST00000364997 102 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 RNU1-149P-201ENST00000390870 161 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 USP9YP33-201ENST00000412220 421 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 RPL23AP39-201ENST00000415533 405 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 USP9YP35-201ENST00000435696 412 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 LARP1BP3-201ENST00000437229 869 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 CNOT7P2-201ENST00000441051 832 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 NF1P3-201ENST00000457709 450 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 ARPC3P2-201ENST00000457786 533 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 RPS18P6-201ENST00000476880 458 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 RN7SL727P-201ENST00000482164 296 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC011825.1-201ENST00000484967 388 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 DEFB109F-201ENST00000491870 277 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC072052.1-201ENST00000496556 306 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 STMN1P2-201ENST00000508435 439 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC126177.5-201ENST00000549599 178 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 MTND1P15-201ENST00000579262 949 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 AP005119.2-201ENST00000579735 1105 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 AP003465.2-201ENST00000602571 373 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC024560.3-201ENST00000608482 349 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 AC026634.1-201ENST00000634369 198 ntBASIC4.62□□□□□ -1.67
SNX18Q96RF0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNX18Q96RF0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX18Q96RF0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX18Q96RF0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNX18Q96RF0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX18Q96RF0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SNX18Q96RF0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC016716.1-201ENST00000265882 708 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 Y_RNA.25-201ENST00000362528 102 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 MIR92A2-201ENST00000385299 75 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 MIR937-201ENST00000401271 86 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 LAP3P1-201ENST00000403648 294 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 GSTM3P2-201ENST00000412746 530 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 RAD23BP2-201ENST00000416003 1207 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC092634.6-201ENST00000418558 192 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC004448.2-201ENST00000422360 586 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SNX18Q96RF0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 MTND1P4-201ENST00000435196 415 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC092641.1-201ENST00000440229 772 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 ST13P20-201ENST00000447996 1065 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 RPL23AP15-201ENST00000450202 459 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC108463.1-201ENST00000450258 347 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC243772.1-201ENST00000451620 410 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 MTCYBP1-201ENST00000454315 1119 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC108161.1-201ENST00000461060 402 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC108751.2-201ENST00000469993 231 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC093270.2-201ENST00000486157 792 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 HMGN2P25-201ENST00000486956 268 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 RPS4XP15-201ENST00000489210 795 ntBASIC4.61□□□□□ -1.67
SNX18Q96RF0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.61□□□□□ -1.67
SNX18Q96RF0 AC025674.1-201ENST00000507074 324 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms