Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AC009969.1-201ENST00000438726 172 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 PTGES3P5-201ENST00000455109 434 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 ARPC3P2-201ENST00000457786 533 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 RPL31P13-201ENST00000484151 370 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AC105137.1-201ENST00000484355 562 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 RPS3AP50-201ENST00000487064 803 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 SNORA64.4-201ENST00000516632 81 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AP003730.1-201ENST00000524605 285 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AP000926.4-201ENST00000527351 454 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 TRAV15-201ENST00000556680 249 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AC027281.1-201ENST00000574178 758 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 KPNA2P3-201ENST00000584190 848 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 ARF4P1-201ENST00000605447 541 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AL021707.7-201ENST00000607991 416 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AC116563.2-201ENST00000624751 535 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 AL732372.2-225ENST00000642124 456 ntBASIC2.71□□□□□ -1.98
AP1S3Q96PC3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
AP1S3Q96PC3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 RNA5SP235-201ENST00000365411 114 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 RPS27AP11-201ENST00000402798 447 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 RN7SKP58-201ENST00000411010 305 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC126124.2-201ENST00000413542 321 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 MTND4P11-201ENST00000417020 1058 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC009480.2-201ENST00000422916 432 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 RPL7P59-201ENST00000447700 943 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 RAB28P3-201ENST00000448325 597 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 CYCSP53-201ENST00000455540 265 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 RPS27AP1-201ENST00000475545 471 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC012181.1-201ENST00000479895 423 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 HMGB3P14-201ENST00000494195 599 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 RPL30P11-201ENST00000495304 339 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC025674.1-201ENST00000507074 324 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 RNU4-60P-201ENST00000517239 135 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 NDUFA5P2-201ENST00000519723 344 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 MTCO1P49-201ENST00000523429 802 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AP000919.1-202ENST00000581139 1264 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 MIR5096-201ENST00000583713 70 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 MIR7703-201ENST00000620784 77 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 CDRT1-208ENST00000630868 794 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AC096656.1-201ENST00000623826 1364 ntBASIC2.7□□□□□ -1.98
AP1S3Q96PC3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
AP1S3Q96PC3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 RPL23AP47-201ENST00000408017 460 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AL691447.1-201ENST00000419456 387 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AL353705.1-201ENST00000433468 480 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 Z74696.2-201ENST00000436514 498 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 TBCAP1-201ENST00000436520 327 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 RPS3AP46-201ENST00000448352 682 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC010655.1-201ENST00000449336 292 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 HMGN2P16-201ENST00000456802 261 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC010618.1-201ENST00000469924 477 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 AC108860.1-201ENST00000484521 383 ntBASIC2.69□□□□□ -1.98
AP1S3Q96PC3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms