Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHAMP1Q96JM3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHAMP1Q96JM3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHAMP1Q96JM3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHAMP1Q96JM3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHAMP1Q96JM3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC005261.2-201ENST00000593427 4258 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC011493.1-201ENST00000596753 1632 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 Y_RNA.88-201ENST00000363029 99 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AL139098.1-201ENST00000407291 389 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 RNU2-6P-201ENST00000411404 190 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC007738.1-201ENST00000413892 348 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 BOLA3P4-201ENST00000418151 400 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 SLC35E1P1-201ENST00000419313 864 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 RGS17P1-201ENST00000423358 553 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AL513175.1-201ENST00000431492 780 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AL139415.2-201ENST00000431968 163 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AL596276.1-201ENST00000434465 418 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 UBE2FP3-201ENST00000436366 524 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 RPL34P20-201ENST00000442771 351 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 YWHAQP9-201ENST00000445891 512 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 TPT1P12-201ENST00000448968 492 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 TCEA1P1-201ENST00000449716 880 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 RN7SL443P-201ENST00000464331 290 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC009127.1-201ENST00000467090 155 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 RPS18P6-201ENST00000476880 458 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC073073.1-201ENST00000493920 463 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC072052.1-201ENST00000496556 306 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC108078.3-201ENST00000502633 489 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC010350.1-201ENST00000504908 231 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC108475.1-201ENST00000507880 950 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC025881.1-201ENST00000518851 512 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 RAB9BP1-201ENST00000519581 626 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AP001189.2-201ENST00000527320 189 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC137768.1-201ENST00000549998 553 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 NDUFB4P11-201ENST00000560510 395 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 PCMTD1P2-201ENST00000565017 355 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 KPNA2P3-201ENST00000584190 848 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 MIR548AB-201ENST00000584917 84 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AP000403.1-201ENST00000603349 851 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC087283.1-201ENST00000604029 1074 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 IMMP1LP1-201ENST00000605170 488 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AC004520.1-201ENST00000608362 1413 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 OR52B5P-202ENST00000641118 1110 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 MTCO1P23-201ENST00000415223 1526 ntBASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.78□□□□□ -1.48
CHAMP1Q96JM3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.77□□□□□ -1.48
CHAMP1Q96JM3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CHAMP1Q96JM3 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 CASC19-284ENST00000642142 1868 ntBASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 DDX18P4-201ENST00000511690 1966 ntBASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 RNY4P24-201ENST00000362735 96 ntBASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 RNU6-259P-201ENST00000383999 107 ntBASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 MIR600-201ENST00000385007 98 ntBASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 OR6C69P-201ENST00000394268 893 ntBASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 AL078599.1-201ENST00000402075 293 ntBASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 RPS16P5-201ENST00000406501 404 ntBASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 RN7SKP114-201ENST00000410327 279 ntBASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.77□□□□□ -1.49
CHAMP1Q96JM3 AC234781.4-201ENST00000419384 244 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms