Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM5Q96HC4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM5Q96HC4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
PDLIM5Q96HC4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PDLIM5Q96HC4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 SNORA37-201ENST00000384504 129 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 SSXP10-201ENST00000402595 565 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 ZNF603P-201ENST00000405613 487 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 RNA5SP36-201ENST00000410197 133 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 NRBF2P2-201ENST00000413087 861 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC008280.1-201ENST00000418851 412 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 SFR1P2-201ENST00000421841 730 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 HMGB1P45-201ENST00000435986 653 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 ELOCP8-201ENST00000439309 332 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 ELOCP15-201ENST00000442090 332 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AL592437.1-201ENST00000443781 492 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC104306.1-201ENST00000449702 371 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 SBDSP1-204ENST00000453858 737 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 RPS29P19-201ENST00000479709 171 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC139783.2-201ENST00000504847 1145 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 TPT1P8-201ENST00000510120 555 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC008958.1-201ENST00000511047 682 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 KCTD9P2-201ENST00000512203 1013 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 MTCO3P27-201ENST00000514397 196 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 HNRNPKP5-201ENST00000515300 253 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC135001.1-201ENST00000544546 283 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 RN7SL622P-201ENST00000585292 275 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC096947.1-201ENST00000603233 470 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AL158050.2-201ENST00000605336 568 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC034229.4-201ENST00000607861 441 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC078880.5-201ENST00000617845 421 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC073342.3-201ENST00000624211 193 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AP003485.1-201ENST00000625093 753 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC090337.1-201ENST00000579651 2074 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 SEPT7P7-201ENST00000420492 1301 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 AC087190.4-201ENST00000574616 8334 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 CASC19-261ENST00000641853 1638 ntBASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM5Q96HC4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC139713.2-214ENST00000642059 1811 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 RNU1-132P-201ENST00000364300 164 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 RNU6-354P-201ENST00000383862 107 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 U6.112-201ENST00000384129 70 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 RNU6-610P-201ENST00000384264 107 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 RNU6-932P-201ENST00000391108 106 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 RPL31P2-201ENST00000413849 377 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 RPL36P19-201ENST00000430744 301 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC010881.1-201ENST00000433830 235 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 NDUFA12P1-201ENST00000455914 406 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 CDC42P1-201ENST00000456658 548 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 RPS29P33-201ENST00000456717 146 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AP000873.1-201ENST00000463987 400 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 RPL5P23-201ENST00000496040 868 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AC110760.3-202ENST00000515177 371 ntBASIC4.12□□□□□ -1.75
PDLIM5Q96HC4 AP003355.1-201ENST00000518956 587 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms