Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 MIR937-201ENST00000401271 86 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AL357515.1-201ENST00000402967 542 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 RNU2-50P-201ENST00000410494 143 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC073335.1-201ENST00000427776 363 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 VDAC1P6-201ENST00000430062 855 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 PRELID3BP10-201ENST00000431957 584 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC093414.1-201ENST00000434712 514 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 BMI1P1-201ENST00000445879 941 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AL589765.3-201ENST00000446084 462 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 COX6CP12-201ENST00000446748 202 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 ST13P20-201ENST00000447996 1065 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 RPL5P32-201ENST00000454085 879 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 SUMO2P2-201ENST00000456482 255 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 RPL23AP56-201ENST00000460778 453 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 GYG1P1-201ENST00000460864 698 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC079140.3-201ENST00000511111 550 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC116347.2-201ENST00000514912 523 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC022447.1-201ENST00000515358 464 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC022880.1-201ENST00000534017 973 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC008033.2-201ENST00000542626 177 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC012414.6-201ENST00000568241 401 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 OR1F2P-201ENST00000570470 933 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC004492.1-201ENST00000607036 742 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC239868.4-201ENST00000608318 671 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC100793.4-201ENST00000613683 429 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC099842.1-201ENST00000619919 596 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 INTS6P1-201ENST00000504674 2530 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AL022393.1-201ENST00000625142 1677 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC009643.2-201ENST00000603543 1448 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 RNU6-462P-201ENST00000362659 105 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 RNA5SP123-201ENST00000363244 119 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 RNU6-501P-201ENST00000364072 100 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AL450338.1-201ENST00000407987 512 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 RNU2-16P-201ENST00000410712 136 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC007899.1-201ENST00000412776 775 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AF274854.1-201ENST00000413236 615 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 CDK8P2-201ENST00000415020 547 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 CHEK2P3-201ENST00000416118 248 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 TBCAP2-201ENST00000416175 326 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC083875.1-201ENST00000419509 405 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AL953862.1-201ENST00000423016 168 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 OR5BE1P-201ENST00000425977 939 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC092162.1-201ENST00000432828 434 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AC092427.1-201ENST00000439177 601 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AL831737.1-201ENST00000441288 271 ntBASIC4.57□□□□□ -1.68
CTHRC1Q96CG8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms