Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-CQ95604 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
HLA-CQ95604 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-CQ95604 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-CQ95604 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HLA-CQ95604 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 RNU6-1287P-201ENST00000362914 107 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 Y_RNA.350-201ENST00000365409 98 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 RNU6-1060P-201ENST00000384664 107 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HLA-CQ95604 RNU6-823P-201ENST00000391042 103 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 E2F6P2-201ENST00000420708 748 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 RPL7P46-201ENST00000425129 740 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 AC092651.1-201ENST00000426110 312 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 AL353662.1-201ENST00000439099 327 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.82□□□□□ -1.32
HLA-CQ95604 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-CQ95604 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.82□□□□□ -1.32
HLA-CQ95604 DEFB109F-201ENST00000491870 277 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.82□□□□□ -1.32
HLA-CQ95604 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-CQ95604 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.82□□□□□ -1.32
HLA-CQ95604 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-CQ95604 AL390726.5-202ENST00000564800 256 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 AC111186.1-201ENST00000604684 130 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 RN7SL787P-201ENST00000613000 284 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 MIR6128-201ENST00000615528 109 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 AC245014.3-201ENST00000618589 347 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.82□□□□□ -1.32
HLA-CQ95604 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 AL442128.2-201ENST00000620246 1824 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-CQ95604 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-CQ95604 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
HLA-CQ95604 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 AL117339.4-201ENST00000608335 7063 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-CQ95604 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-CQ95604 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HLA-CQ95604 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
HLA-CQ95604 MAPK10-347ENST00000641762 2856 ntBASIC6.82□□□□□ -1.32
HLA-CQ95604 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-CQ95604 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.82□□□□□ -1.32
HLA-CQ95604 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.82□□□□□ -1.32
HLA-CQ95604 NBPF8-201ENST00000583271 5330 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-CQ95604 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-CQ95604 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HLA-CQ95604 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-CQ95604 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-CQ95604 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-CQ95604 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-CQ95604 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-CQ95604 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-CQ95604 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-CQ95604 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HLA-CQ95604 RHOT1P2-201ENST00000366423 333 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-CQ95604 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HLA-CQ95604 Y_RNA.515-201ENST00000384535 112 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 RNU6-713P-201ENST00000384761 107 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 RNU6-33P-201ENST00000384793 107 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 MIR137-201ENST00000385223 102 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-CQ95604 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.81□□□□□ -1.32
HLA-CQ95604 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-CQ95604 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-CQ95604 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-CQ95604 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-CQ95604 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-CQ95604 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 OSTCP8-201ENST00000445117 448 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-CQ95604 HMGB3P21-201ENST00000452483 547 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-CQ95604 SNX18P26-201ENST00000458433 740 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 RPS3AP41-201ENST00000462701 778 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 RN7SL515P-201ENST00000463999 297 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.81□□□□□ -1.32
HLA-CQ95604 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-CQ95604 AC020893.1-201ENST00000502452 580 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 KHDC1P1-201ENST00000511053 508 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.81□□□□□ -1.32
HLA-CQ95604 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.81□□□□□ -1.32
HLA-CQ95604 AC023157.2-201ENST00000540596 141 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 AC079600.1-201ENST00000550326 297 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 AL137100.2-201ENST00000555786 315 ntBASIC6.81□□□□□ -1.32
HLA-CQ95604 AC092121.1-201ENST00000569452 202 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms