Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC006499.3-201ENST00000506077 748 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 MTCO1P30-201ENST00000515244 580 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 RNU2-30P-201ENST00000516209 141 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 OR7K1P-201ENST00000546439 926 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC090022.1-201ENST00000546569 311 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AL358913.1-201ENST00000554342 121 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC007448.1-201ENST00000582714 234 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC092354.1-201ENST00000606057 376 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AL512624.1-201ENST00000613638 469 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC243756.2-201ENST00000618406 463 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC140113.4-201ENST00000622087 222 ntBASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4AQ8WYN0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ATG4AQ8WYN0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
ATG4AQ8WYN0 AC139713.2-215ENST00000641428 5037 ntBASIC4.84□□□□□ -1.64
ATG4AQ8WYN0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.84□□□□□ -1.64
ATG4AQ8WYN0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ATG4AQ8WYN0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 RNA5SP191-201ENST00000362585 102 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 U3.4-201ENST00000363352 213 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 ATP5F1P4-201ENST00000397288 746 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 CYCSP45-201ENST00000402289 315 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AL589647.1-201ENST00000402485 466 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC234782.4-201ENST00000417646 1048 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 PPIAP13-201ENST00000434706 478 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 KATNBL1P6-201ENST00000453433 915 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 RPL37P3-201ENST00000456825 293 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 RPSAP50-201ENST00000481955 852 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC005912.1-201ENST00000495392 255 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC022447.1-201ENST00000515358 464 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 RNU1-6P-201ENST00000516290 144 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC060788.1-201ENST00000521318 469 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AP000873.5-201ENST00000533906 236 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 HAUS8P1-201ENST00000549005 542 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC233702.9-201ENST00000581528 203 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC008507.1-201ENST00000587506 734 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC078795.2-201ENST00000602835 1252 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC004987.4-201ENST00000603383 338 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC091488.1-201ENST00000604239 660 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AL121612.2-201ENST00000612261 482 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 MIR7844-201ENST00000616161 122 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC006338.2-201ENST00000616864 791 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AL590240.3-201ENST00000621416 943 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 CASC19-204ENST00000641001 2055 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AL606537.1-201ENST00000607258 2011 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 MTND5P29-201ENST00000458676 1807 ntBASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
ATG4AQ8WYN0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AP001273.1-201ENST00000624493 3152 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms