Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPS26P24-201ENST00000497656 331 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC104984.5-201ENST00000586878 94 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC107294.1-201ENST00000609524 467 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AL365361.1-201ENST00000566942 3481 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 TTC39DP-201ENST00000416781 1688 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AL160175.1-201ENST00000428124 247 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC097262.1-201ENST00000452559 548 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 FGF7P3-201ENST00000454645 303 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 RPL23AP73-201ENST00000492507 471 ntBASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHROOM3Q8TF72 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 SNORD17-201ENST00000390930 237 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 HSFY4P-201ENST00000415994 1181 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AC006989.1-201ENST00000427212 131 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AC017083.1-201ENST00000428093 483 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AC037198.2-201ENST00000478845 733 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 NDUFB9P3-201ENST00000521269 501 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AC090281.1-201ENST00000523019 276 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 DUXAP6-201ENST00000553858 601 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AL034351.1-201ENST00000605288 668 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AL451049.1-201ENST00000608672 497 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AC010809.3-201ENST00000621310 641 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AC058791.1-201ENST00000608412 3198 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 MTCO1P7-201ENST00000419523 1542 ntBASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHROOM3Q8TF72 AC127526.1-201ENST00000417526 366 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AC025750.2-201ENST00000442609 450 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 RPS15AP29-201ENST00000445539 400 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AL121766.1-201ENST00000547436 487 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AP003355.3-201ENST00000623465 114 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 HSPA8P1-201ENST00000425843 1833 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AL445213.1-201ENST00000412589 747 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 SNORA70.17-201ENST00000516449 133 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AC027281.1-201ENST00000574178 758 ntBASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHROOM3Q8TF72 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 OR10J6P-201ENST00000289731 930 ntBASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 OR6K3-202ENST00000368146 996 ntBASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 RNU6-167P-201ENST00000384292 106 ntBASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 AL136131.1-201ENST00000406079 803 ntBASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 Z99755.1-201ENST00000414048 380 ntBASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 RPS29P4-201ENST00000414733 161 ntBASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 RNF19BPX-201ENST00000426224 625 ntBASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 Z75741.1-201ENST00000446793 314 ntBASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHROOM3Q8TF72 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms