Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNU6-452P-201ENST00000384406 107 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 MIR568-201ENST00000385036 95 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 SNRPFP1-201ENST00000414761 252 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 TMBIM7P-201ENST00000418074 855 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC073335.1-201ENST00000427776 363 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 RPL36AP53-201ENST00000432891 316 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AL627308.1-201ENST00000435693 821 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 SKP1P1-201ENST00000438081 489 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AL450023.1-201ENST00000450868 751 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 RNU1-88P-201ENST00000459274 128 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC090638.1-201ENST00000498296 909 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC048346.1-201ENST00000510247 144 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC074255.1-201ENST00000511259 501 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC107953.1-201ENST00000522216 297 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 DEFB131D-201ENST00000526803 184 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC068587.4-201ENST00000533893 186 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC023050.3-201ENST00000541142 333 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 TRAV15-201ENST00000556680 249 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 MRPS21P7-201ENST00000566937 238 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC068790.5-201ENST00000602741 355 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 XIAPP1-201ENST00000603162 600 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 AC018445.2-201ENST00000622987 260 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 SAMMSON-210ENST00000641260 1308 ntBASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SHKBP1Q8TBC3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 RNU6-216P-201ENST00000363282 104 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 SUGT1P1-201ENST00000379514 476 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 GAPDHP42-201ENST00000406848 981 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 MTND3P8-201ENST00000412909 339 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 OR51A3P-201ENST00000413596 924 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 RPL7P57-201ENST00000423238 740 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AC099563.1-201ENST00000456086 418 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 RPL7P39-201ENST00000481157 744 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 Y_RNA.720-201ENST00000517166 92 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AL049779.3-201ENST00000557141 606 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AC005668.1-201ENST00000571142 476 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AL512605.2-201ENST00000592972 256 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AC025857.2-201ENST00000602711 238 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AC211433.2-201ENST00000608433 387 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 DISC2.1-201ENST00000612827 205 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AL732618.1-201ENST00000623251 301 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AC005618.4-201ENST00000625053 554 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AC063952.1-203ENST00000634410 658 ntBASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHKBP1Q8TBC3 AC006378.2-201ENST00000623178 2476 ntBASIC5.94□□□□□ -1.46
SHKBP1Q8TBC3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SHKBP1Q8TBC3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms