Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RN7SKP160-201ENST00000363804 340 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 RNU6-533P-201ENST00000384144 107 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 Y_RNA.557-201ENST00000384680 107 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 MIR142-201ENST00000384835 87 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AL592429.1-201ENST00000403909 1473 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 Y_RNA.608-201ENST00000410647 95 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 NDUFB4P5-201ENST00000415445 361 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 RPL31P35-201ENST00000431058 377 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 RPL12P39-201ENST00000455456 496 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 PSAT1P4-201ENST00000466500 526 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 HMGB3P17-201ENST00000504195 649 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 CDH12P2-201ENST00000504393 298 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 FTH1P9-201ENST00000513251 355 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 RNU4-49P-201ENST00000516080 140 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 RNU6-559P-201ENST00000516151 98 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AP003467.2-201ENST00000520175 319 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 MRPS21P7-201ENST00000566937 238 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 RBM22P12-201ENST00000567098 1255 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AC015720.2-201ENST00000567709 334 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 MIR4311-201ENST00000580794 100 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AC115286.1-201ENST00000604298 434 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AC233309.1-201ENST00000619522 751 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AP006248.2-201ENST00000623309 592 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AC022418.1-201ENST00000624118 445 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AC011815.3-201ENST00000624194 473 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AL133216.2-202ENST00000634512 349 ntBASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NEDD1Q8NHV4 PWAR1-201ENST00000624188 2414 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC032011.1-201ENST00000611703 1549 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 SNORA69-201ENST00000383895 132 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AL391361.1-201ENST00000405580 489 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 HMGB3P2-201ENST00000411913 584 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 SNRPFP1-201ENST00000414761 252 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC005033.1-201ENST00000428904 813 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC019185.1-201ENST00000442718 389 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC135999.1-201ENST00000478962 479 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 Y_RNA.672-201ENST00000516289 104 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 RNU6-988P-201ENST00000519081 107 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 IGKV2-18-201ENST00000522607 343 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC068790.5-201ENST00000602741 355 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AL512624.1-201ENST00000613638 469 ntBASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
NEDD1Q8NHV4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NEDD1Q8NHV4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms