Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RPL35P6-201ENST00000490024 372 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 PPBPP1-201ENST00000510807 373 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC008694.2-201ENST00000517591 306 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC023632.1-201ENST00000518463 375 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC008562.1-201ENST00000521763 330 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 COX6B1P6-201ENST00000522347 255 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC023538.1-201ENST00000534576 736 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AL352979.3-201ENST00000553515 247 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 MTND3P12-201ENST00000559068 328 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 MTND4LP24-201ENST00000572277 291 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 MIR5708-201ENST00000579723 85 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 MIR3939-201ENST00000582614 106 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC008759.1-201ENST00000589783 983 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 ELOCP35-201ENST00000604289 336 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC025588.2-201ENST00000604851 466 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC107952.2-201ENST00000606048 486 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC099676.1-201ENST00000608886 657 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AL592148.2-201ENST00000612210 372 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC243654.2-201ENST00000612843 443 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC018926.3-201ENST00000618841 406 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 MIR3653-201ENST00000625572 110 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 CDRT1-208ENST00000630868 794 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 AC027290.2-201ENST00000623210 18662 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 MTND4P8-201ENST00000514997 1362 ntBASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH20Q8N6Y1 BX005019.1-201ENST00000561881 1810 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AL158163.1-201ENST00000603915 1649 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 RNU1-132P-201ENST00000364300 164 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 OR1L1-202ENST00000373686 1083 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 SNORA40.2-201ENST00000390847 128 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC097374.1-203ENST00000400783 485 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC136624.1-201ENST00000400791 413 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 HSPD1P16-201ENST00000402302 394 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 VN1R8P-201ENST00000407739 893 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 RNU6-575P-201ENST00000411326 105 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 UBTFL3-201ENST00000418934 1024 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 MOB1AP1-201ENST00000430903 535 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC133473.1-201ENST00000455173 299 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 UBTFL6-201ENST00000477929 1024 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC091167.1-201ENST00000492017 396 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC118282.2-201ENST00000508739 374 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AL592156.1-201ENST00000508758 304 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC113347.3-201ENST00000509113 148 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 PARP4P3-201ENST00000510265 317 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 NDUFB4P12-201ENST00000513465 390 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 MTND2P38-201ENST00000522536 667 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 MTCO2P15-201ENST00000532655 656 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC023050.2-201ENST00000544968 387 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 PARP1P2-201ENST00000556806 195 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 NIFKP6-201ENST00000598115 845 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC009237.17-201ENST00000618111 748 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AL158163.2-201ENST00000619110 700 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AP002782.1-201ENST00000623107 614 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AC087821.2-201ENST00000637086 450 ntBASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH20Q8N6Y1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms