Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AP002001.2-201ENST00000529025 1469 ntBASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf40Q8IXQ3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
C9orf40Q8IXQ3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.65□□□□□ -1.82
C9orf40Q8IXQ3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 ENSAP3-201ENST00000312710 333 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 RN7SKP280-201ENST00000364196 304 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 RPL22P22-201ENST00000395439 379 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AL035405.1-201ENST00000400795 710 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 Z97055.1-201ENST00000419730 712 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 DEFB130D-201ENST00000426866 237 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC073069.1-201ENST00000428657 441 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 HMGN1P5-201ENST00000448591 263 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AL162388.1-201ENST00000450912 352 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 MTND2P39-201ENST00000457230 764 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 PPIAP15-201ENST00000479662 484 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC008565.1-201ENST00000509046 885 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC018797.3-201ENST00000513388 1241 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 NDUFB4P12-201ENST00000513465 390 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC026402.1-201ENST00000513642 170 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC112198.4-201ENST00000515450 351 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 SMARCE1P4-201ENST00000523647 241 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC068339.2-201ENST00000534395 618 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC104072.1-201ENST00000568817 668 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 MTND4LP24-201ENST00000572277 291 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC020914.4-201ENST00000597690 277 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC096586.1-201ENST00000610267 561 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC093875.1-201ENST00000623688 504 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 ATE1-AS1-202ENST00000636460 506 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AL451142.2-201ENST00000429076 2090 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC100871.1-201ENST00000507871 1456 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AC016588.2-201ENST00000632484 3021 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 AL353743.4-201ENST00000422653 1547 ntBASIC3.65□□□□□ -1.83
C9orf40Q8IXQ3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 FAM35DP-201ENST00000323387 2712 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 Y_RNA.126-201ENST00000363382 111 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 RNU6-213P-201ENST00000384051 104 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AC069282.1-201ENST00000411911 526 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AL450992.3-201ENST00000413192 568 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 PPIAP17-201ENST00000438507 471 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 HMGB1P37-201ENST00000439613 609 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 RPS29P7-201ENST00000439662 171 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AC068135.1-201ENST00000446164 246 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AL096803.2-201ENST00000450032 677 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AC239809.1-201ENST00000450470 217 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 HMGB3P22-202ENST00000451823 572 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 MTND3P3-201ENST00000505004 126 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 ATP5F1P7-201ENST00000567330 760 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AC141257.3-201ENST00000572906 215 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AC022916.3-201ENST00000592961 742 ntBASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
C9orf40Q8IXQ3 AC008759.3-201ENST00000613300 508 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms