Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SNRPEP6-201ENST00000407465 277 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 MIR548I3-201ENST00000408378 149 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 MIR548I1-201ENST00000408810 149 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 RPS12P24-201ENST00000412619 387 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC092634.6-201ENST00000418558 192 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AL160004.2-201ENST00000432935 350 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 UBE2V1P5-201ENST00000440070 405 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 ATP5LP2-201ENST00000440646 311 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 RPL31P44-201ENST00000447680 377 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 SBDSP1-204ENST00000453858 737 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 RPS4XP10-201ENST00000465034 731 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC098847.1-201ENST00000473094 348 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 PFN1P6-201ENST00000476786 399 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 RPL38P3-201ENST00000484463 213 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 RPL38P4-201ENST00000502376 214 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 PRMT5P1-201ENST00000514351 598 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 RNU6-1003P-201ENST00000517099 105 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 OR5D15P-201ENST00000531671 942 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 MIR3167-201ENST00000579623 85 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC012254.3-201ENST00000591183 2117 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC006115.2-201ENST00000596823 202 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC008782.1-201ENST00000603386 430 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 RMST_9.1-201ENST00000619945 193 ntBASIC5.4□□□□□ -1.54
ATG4DQ86TL0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
ATG4DQ86TL0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.4□□□□□ -1.55
ATG4DQ86TL0 TAB3P1-202ENST00000452645 1634 ntBASIC5.4□□□□□ -1.55
ATG4DQ86TL0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ATG4DQ86TL0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 RNU5E-1-201ENST00000362477 120 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 RNU5E-8P-201ENST00000363502 116 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 RN7SKP128-201ENST00000364270 303 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 Y_RNA.307-201ENST00000365022 117 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 RN7SKP269-201ENST00000365545 319 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 TMSB4XP8-201ENST00000402089 135 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 MRPL42P2-201ENST00000403169 426 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AL121834.1-202ENST00000404494 277 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 MIR1305-201ENST00000408300 86 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AL354890.1-201ENST00000413730 346 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 TMSB4XP6-201ENST00000415187 135 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 CHEK2P3-201ENST00000416118 248 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 HSPE1P1-201ENST00000421494 318 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 TMSB4XP1-201ENST00000424567 135 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 RPS29P14-201ENST00000431518 171 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AL445928.1-201ENST00000435545 222 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AL663074.2-201ENST00000440621 479 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 PPIAP27-201ENST00000453800 265 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 NF1P3-201ENST00000457709 450 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 Y_RNA.635-201ENST00000459041 101 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC007547.1-201ENST00000462177 490 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 RN7SL269P-201ENST00000467795 305 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC094085.1-201ENST00000468914 584 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC078785.3-201ENST00000476607 425 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC092865.4-201ENST00000477936 615 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC111193.1-201ENST00000504097 155 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 TRIM77BP-201ENST00000524985 1119 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms