Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 AL732372.2-225ENST00000642124 456 ntBASIC2.65□□□□□ -1.99
VPS13CQ709C8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13CQ709C8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
VPS13CQ709C8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13CQ709C8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 RNU1-143P-201ENST00000516296 146 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 AL139174.1-201ENST00000531489 886 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 HMGB1P6-201ENST00000569046 646 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC006946.3-201ENST00000609791 756 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 U1.23-201ENST00000610293 146 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 RNU1-68P-201ENST00000615382 146 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 U1.39-201ENST00000621562 146 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13CQ709C8 RIOK3P1-201ENST00000418778 1528 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 DDX18P4-201ENST00000511690 1966 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13CQ709C8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC004552.1-201ENST00000419089 348 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC019097.1-201ENST00000424783 735 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 RNA5SP103-201ENST00000459503 118 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC110794.1-201ENST00000505816 425 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC008413.1-201ENST00000511864 177 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 OR7M1P-201ENST00000608946 533 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC022149.2-201ENST00000621061 203 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 MTCO1P8-201ENST00000416914 1523 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 Z95331.1-201ENST00000623075 23112 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13CQ709C8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13CQ709C8 NPM1P11-201ENST00000417106 855 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 MYL8P-204ENST00000431574 518 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC010306.1-201ENST00000523223 1117 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.64□□□□□ -1.99
VPS13CQ709C8 AC243829.7-201ENST00000633081 225 ntBASIC2.64□□□□□ -1.99
VPS13CQ709C8 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13CQ709C8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13CQ709C8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13CQ709C8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 HLA-N-201ENST00000437516 135 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 PPBPP1-201ENST00000510807 373 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 AC109329.2-201ENST00000519658 482 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 AC067852.4-201ENST00000590314 478 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 NAMPTP1-201ENST00000440465 2514 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 AC233981.1-201ENST00000423224 461 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 AL133477.1-201ENST00000457472 514 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 SEPT14P1-201ENST00000458703 648 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13CQ709C8 uc_338.25-201ENST00000613756 156 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13CQ709C8 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13CQ709C8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13CQ709C8 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13CQ709C8 BX276092.3-201ENST00000424182 230 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 RPS17P11-201ENST00000474297 293 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 AC008638.3-201ENST00000603341 463 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 BNIP3P41-202ENST00000616656 861 ntBASIC2.63□□□□□ -1.99
VPS13CQ709C8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
VPS13CQ709C8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13CQ709C8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13CQ709C8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13CQ709C8 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13CQ709C8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13CQ709C8 SNORA7.4-201ENST00000384249 137 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 CBX1P4-201ENST00000439415 457 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 AC021205.2-201ENST00000480069 347 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 RNU6-513P-201ENST00000516104 104 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 VN1R90P-201ENST00000595717 726 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 AL139395.1-201ENST00000603662 160 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 AC090971.4-201ENST00000560291 1800 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms