Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC112200.1-201ENST00000625015 234 ntBASIC4.04□□□□□ -1.76
C11orf88Q6PI97 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.04□□□□□ -1.76
C11orf88Q6PI97 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.04□□□□□ -1.76
C11orf88Q6PI97 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.04□□□□□ -1.76
C11orf88Q6PI97 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
C11orf88Q6PI97 AC090337.1-201ENST00000579651 2074 ntBASIC4.04□□□□□ -1.76
C11orf88Q6PI97 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
C11orf88Q6PI97 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
C11orf88Q6PI97 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
C11orf88Q6PI97 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
C11orf88Q6PI97 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 Z98755.1-201ENST00000407015 1384 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AC130650.2-201ENST00000618736 2403 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 OR56B2P-201ENST00000317102 954 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 RNU6-1066P-201ENST00000363573 105 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 Y_RNA.578-201ENST00000390903 88 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 CHEK2P3-201ENST00000416118 248 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AL049745.1-201ENST00000433953 286 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AC127537.2-201ENST00000439258 465 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AC011753.3-201ENST00000443436 406 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 RN7SL481P-201ENST00000477764 299 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 PPBPP1-201ENST00000510807 373 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 MTND2P7-201ENST00000521337 640 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AC068790.5-201ENST00000602741 355 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AC105254.2-201ENST00000603636 436 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 AC012618.3-205ENST00000637896 1496 ntBASIC4.03□□□□□ -1.76
C11orf88Q6PI97 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
C11orf88Q6PI97 RNU6-989P-201ENST00000362756 107 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 RNU6-492P-201ENST00000363035 104 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 SNORA51.2-201ENST00000364595 132 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 RNU6-1181P-201ENST00000384191 106 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 MTND4LP20-201ENST00000402379 270 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AL049697.2-201ENST00000403708 294 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AL583834.1-201ENST00000406943 343 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 OR8G2P-201ENST00000412796 908 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 Z74021.1-201ENST00000423610 407 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 RPL31P54-201ENST00000429803 370 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 RPL23AP25-201ENST00000430973 463 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 ELOCP18-201ENST00000434209 337 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AC026414.1-201ENST00000504046 698 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 ARL2BPP5-201ENST00000523141 481 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 MTCO3P15-201ENST00000526563 574 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AC087897.1-201ENST00000550134 156 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 ZNF192P1-203ENST00000565888 810 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 MIR5708-201ENST00000579723 85 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 MIR4691-201ENST00000583764 85 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 BNIP3P31-201ENST00000604515 566 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AP002802.2-201ENST00000605877 235 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AL627230.1-201ENST00000613077 211 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AL591926.8-201ENST00000616876 211 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 MIR7154-201ENST00000620673 73 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AL359757.1-201ENST00000623176 255 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AC087821.2-201ENST00000637086 450 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 IQCB2P-201ENST00000401788 1633 ntBASIC4.02□□□□□ -1.77
C11orf88Q6PI97 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms