Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 MIR4458-201ENST00000578872 75 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AL008729.2-201ENST00000606393 473 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AC135507.1-201ENST00000607214 561 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AC091979.2-201ENST00000607514 214 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 AC073114.1-201ENST00000612027 490 ntBASIC4.84□□□□□ -1.63
RNF220Q5VTB9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF220Q5VTB9 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
RNF220Q5VTB9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
RNF220Q5VTB9 TLK1P1-201ENST00000456760 2440 ntBASIC4.84□□□□□ -1.64
RNF220Q5VTB9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.84□□□□□ -1.64
RNF220Q5VTB9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF220Q5VTB9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 Y_RNA.77-201ENST00000362962 107 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 MIR105-1-201ENST00000385222 81 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 RPS3AP26-201ENST00000398259 784 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 DHFRP6-201ENST00000401776 268 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AL592291.1-201ENST00000403830 352 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 TPMTP3-201ENST00000411928 735 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 RPL7P8-201ENST00000411964 730 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC244035.1-201ENST00000430042 390 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AL356276.2-201ENST00000435919 558 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 PCNPP2-201ENST00000441651 455 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 OR52E7P-201ENST00000452394 933 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 GYG1P1-201ENST00000460864 698 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AL133445.1-201ENST00000467051 452 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC022034.3-201ENST00000471393 478 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 MTND5P13-201ENST00000513046 1079 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 ENPP7P9-201ENST00000514456 627 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 MTND5P4-201ENST00000514978 288 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 NDUFA5P2-201ENST00000519723 344 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 RPL23AP53-201ENST00000521854 457 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC092851.1-201ENST00000535964 478 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC005868.1-201ENST00000536421 331 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 PSMB7P1-201ENST00000556349 514 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 ROCK1P1-201ENST00000573767 549 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 MTCYBP33-201ENST00000575007 1130 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC025588.3-201ENST00000604182 274 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 SUGT1P3-202ENST00000604259 383 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC115286.1-201ENST00000604298 434 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AP003117.2-201ENST00000606010 545 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AC092653.1-201ENST00000608509 531 ntBASIC4.83□□□□□ -1.64
RNF220Q5VTB9 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF220Q5VTB9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC017104.4-201ENST00000636283 1592 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AL356473.1-201ENST00000406203 1408 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 RPL23AP57-201ENST00000332361 466 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AP000580.1-201ENST00000404439 358 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 NPM1P11-201ENST00000417106 855 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AL138899.2-201ENST00000439139 499 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 MTND1P29-201ENST00000448112 647 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 RPL36AP33-201ENST00000450395 310 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 KATNBL1P6-201ENST00000453433 915 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 ZNF114P1-201ENST00000453500 292 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms