Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RFPL1S-203ENST00000539579 330 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AC007424.1-203ENST00000554613 687 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 BNIP3P5-201ENST00000562290 498 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AC244205.2-202ENST00000635781 342 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 AL732372.2-225ENST00000642124 456 ntBASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN20Q4JDL3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 U3.15-201ENST00000365398 212 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC093698.1-201ENST00000423843 571 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 PPIAP17-201ENST00000438507 471 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AL353898.1-201ENST00000444055 238 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC010655.1-201ENST00000449336 292 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC021146.7-201ENST00000509604 775 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 RANP9-201ENST00000519957 271 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC092851.1-201ENST00000535964 478 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 OR4U1P-201ENST00000554958 912 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC009101.1-201ENST00000568135 242 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 MTATP6P25-201ENST00000574491 261 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AP001180.3-201ENST00000582221 145 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC245128.3-201ENST00000594721 748 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AP004372.1-201ENST00000604842 844 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC010680.4-201ENST00000605334 543 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AL391497.1-201ENST00000608671 547 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 AC055764.2-201ENST00000610089 670 ntBASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN20Q4JDL3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AC007685.1-201ENST00000329806 452 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 SNORA62.2-201ENST00000364672 152 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 RPL21P17-201ENST00000397467 475 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AL445189.1-201ENST00000405722 338 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 RPL36AP36-201ENST00000418616 301 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 BTF3P9-201ENST00000418784 283 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AL035423.1-201ENST00000420331 213 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 NDUFA5P10-201ENST00000432147 357 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AL035246.1-201ENST00000433554 1255 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AC074367.1-201ENST00000438685 1125 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 EXTL2P1-201ENST00000446218 416 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 MTCO3P16-201ENST00000454456 754 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AC084357.1-201ENST00000473404 255 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 ACTR3P3-201ENST00000480448 893 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 RNU6-751P-201ENST00000516382 101 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 SNORA70.18-201ENST00000516696 98 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AC091515.1-201ENST00000548110 679 ntBASIC3.8□□□□□ -1.8
PTPN20Q4JDL3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms