Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.6□□□□□ -1.67
USP41Q3LFD5 AL355578.1-201ENST00000607405 1328 ntBASIC4.6□□□□□ -1.67
USP41Q3LFD5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
USP41Q3LFD5 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
USP41Q3LFD5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP41Q3LFD5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP41Q3LFD5 AC119744.1-201ENST00000454746 1715 ntBASIC4.6□□□□□ -1.67
USP41Q3LFD5 AL450326.2-201ENST00000421913 1962 ntBASIC4.6□□□□□ -1.67
USP41Q3LFD5 AL133243.3-201ENST00000617415 3004 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
USP41Q3LFD5 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
USP41Q3LFD5 RNU4-68P-201ENST00000364314 141 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 RNA5SP151-201ENST00000365632 117 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 Y_RNA.472-201ENST00000384322 102 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC025750.1-201ENST00000399891 379 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 PPIAP31-201ENST00000405422 495 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AL445189.1-201ENST00000405722 338 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 SNORA74C-2-201ENST00000411179 201 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 GSTM3P2-201ENST00000412746 530 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 HMGB3P5-201ENST00000428894 612 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 RPL7P4-203ENST00000430239 730 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 COX6B1P7-201ENST00000430845 235 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 CEACAMP1-201ENST00000434624 1035 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 MTND1P33-201ENST00000446251 917 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 MRPL35P4-201ENST00000453682 566 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 RPL23AP81-201ENST00000455252 467 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 RPL37P3-201ENST00000456825 293 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 NAP1L1P3-201ENST00000462291 880 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC099522.1-202ENST00000514718 367 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC008562.1-201ENST00000521763 330 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 DYNLL1P4-201ENST00000549314 266 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC044913.1-201ENST00000557200 430 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC018552.3-201ENST00000567416 561 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AGGF1P6-201ENST00000569213 976 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 RN7SL600P-201ENST00000581811 299 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 AP000238.1-201ENST00000608759 426 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC140725.3-201ENST00000616193 880 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC018926.3-201ENST00000618841 406 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC007546.2-201ENST00000623996 360 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC097520.1-201ENST00000624435 385 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 CR392039.4-201ENST00000624968 501 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 CDRT1-208ENST00000630868 794 ntBASIC4.59□□□□□ -1.67
USP41Q3LFD5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.59□□□□□ -1.67
USP41Q3LFD5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
USP41Q3LFD5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP41Q3LFD5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 AC092435.4-201ENST00000623012 4159 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 MAPK10-303ENST00000641324 3959 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 AC046144.1-201ENST00000478559 1853 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
USP41Q3LFD5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP41Q3LFD5 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 RNU1-87P-201ENST00000363727 170 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 RNU4-51P-201ENST00000364206 140 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 MIR93-201ENST00000385024 80 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 RN7SKP182-201ENST00000410772 298 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 RNU2-6P-201ENST00000411404 190 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 AL356095.1-201ENST00000417217 199 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 RPS3AP37-201ENST00000419176 745 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 AC027644.1-201ENST00000419595 298 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 AL590609.2-201ENST00000421430 368 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 AC009965.2-201ENST00000425328 970 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 RAC1P8-201ENST00000427086 527 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 EEF1A1P1-201ENST00000447052 739 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 AL359073.1-201ENST00000448036 403 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 RPL5P30-201ENST00000465511 891 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 AC006511.1-201ENST00000470614 315 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 RPS26P28-201ENST00000470806 348 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 RPL23AP65-201ENST00000475608 468 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 AL132838.2-201ENST00000492041 314 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 AF186190.1-201ENST00000517470 480 ntBASIC4.58□□□□□ -1.68
USP41Q3LFD5 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.58□□□□□ -1.68
USP41Q3LFD5 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms