Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL355297.3-201ENST00000604082 446 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL022099.1-201ENST00000604551 712 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 SNORA74.4-201ENST00000607595 199 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL352984.2-201ENST00000611153 546 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC004792.1-201ENST00000614523 137 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC022467.1-201ENST00000614738 749 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AC009237.17-201ENST00000618111 748 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 FAM27E2-201ENST00000619668 403 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AP001264.1-201ENST00000620602 703 ntBASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.85□□□□□ -1.31
CTC1Q2NKJ3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC073365.1-203ENST00000641055 1992 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 Y_RNA.152-201ENST00000363578 100 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 RNU6-38P-201ENST00000384085 107 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 Y_RNA.506-201ENST00000384494 102 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 MIR130B-202ENST00000385018 82 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 RN7SKP266-201ENST00000410232 287 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 RNA5SP178-201ENST00000410380 128 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AL136133.1-201ENST00000413694 376 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 GJA6P-201ENST00000415117 1042 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC048351.1-201ENST00000420064 602 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC005019.1-201ENST00000436455 431 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 MRPS21P3-201ENST00000436696 262 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 YWHAZP8-201ENST00000436935 731 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 BX248409.1-201ENST00000455497 255 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC005008.1-201ENST00000456151 612 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 RPL37P3-201ENST00000456825 293 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 RNU6-333P-201ENST00000459117 107 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 GMFBP1-201ENST00000467831 427 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 KHDC1P1-201ENST00000511053 508 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 HMGB3P26-201ENST00000560051 582 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC106785.4-201ENST00000569492 412 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC006557.5-201ENST00000603126 811 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC011468.4-201ENST00000603942 409 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 MIR6085-201ENST00000618314 110 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC103858.2-201ENST00000621471 543 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC127459.3-201ENST00000624328 466 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC079776.5-201ENST00000641920 211 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 TNPO1P2-201ENST00000426249 2665 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 AC011978.2-201ENST00000569835 2054 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 UG0898H09-202ENST00000623646 7040 ntBASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTC1Q2NKJ3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.84□□□□□ -1.32
CTC1Q2NKJ3 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
CTC1Q2NKJ3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CTC1Q2NKJ3 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
CTC1Q2NKJ3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CTC1Q2NKJ3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
CTC1Q2NKJ3 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CTC1Q2NKJ3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.83□□□□□ -1.32
CTC1Q2NKJ3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms