Protein–RNA interactions for Protein: Q16787

LAMA3, Laminin subunit alpha-3, humanhuman

Predictions only

Length 3,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3Q16787 AC009963.1-201ENST00000417265 157 ntBASIC3.43□□□□□ -1.86
LAMA3Q16787 HMGB3P20-201ENST00000417997 600 ntBASIC3.43□□□□□ -1.86
LAMA3Q16787 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.43□□□□□ -1.86
LAMA3Q16787 EEF1B2P7-201ENST00000451177 676 ntBASIC3.43□□□□□ -1.86
LAMA3Q16787 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.43□□□□□ -1.86
LAMA3Q16787 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LAMA3Q16787 AADACP1-206ENST00000561502 1193 ntBASIC3.43□□□□□ -1.86
LAMA3Q16787 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LAMA3Q16787 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC3.43□□□□□ -1.86
LAMA3Q16787 RNA5SP42-201ENST00000364278 115 ntBASIC3.43□□□□□ -1.86
LAMA3Q16787 MIR512-1-201ENST00000384913 84 ntBASIC3.43□□□□□ -1.86
LAMA3Q16787 RPSAP41-201ENST00000439695 860 ntBASIC3.43□□□□□ -1.86
LAMA3Q16787 AC021205.1-201ENST00000468797 348 ntBASIC3.43□□□□□ -1.86
LAMA3Q16787 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.43□□□□□ -1.86
LAMA3Q16787 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LAMA3Q16787 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC3.43□□□□□ -1.86
LAMA3Q16787 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.42□□□□□ -1.86
LAMA3Q16787 AC063976.3-201ENST00000426849 329 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 NECAP1P2-201ENST00000455668 727 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 HIGD1AP13-201ENST00000509878 289 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.42□□□□□ -1.86
LAMA3Q16787 RNA5SP367-201ENST00000516557 118 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 AC018552.3-201ENST00000567416 561 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 AC138761.3-201ENST00000579993 334 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 AC026979.4-201ENST00000606555 645 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 AC103710.3-201ENST00000608157 948 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
LAMA3Q16787 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LAMA3Q16787 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.42□□□□□ -1.86
LAMA3Q16787 DCAF13P3-201ENST00000561147 1334 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LAMA3Q16787 RPS3P1-201ENST00000456781 192 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 MIR4472-2-201ENST00000582069 67 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.42□□□□□ -1.86
LAMA3Q16787 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LAMA3Q16787 AL078595.2-201ENST00000605309 1780 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LAMA3Q16787 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
LAMA3Q16787 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LAMA3Q16787 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LAMA3Q16787 AL355596.1-201ENST00000565399 3996 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 AC007563.3-201ENST00000433233 371 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.42□□□□□ -1.86
LAMA3Q16787 RPL23AP23-201ENST00000452590 471 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.42□□□□□ -1.86
LAMA3Q16787 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.42□□□□□ -1.86
LAMA3Q16787 CYP4A43P-201ENST00000568156 121 ntBASIC3.42□□□□□ -1.86
LAMA3Q16787 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LAMA3Q16787 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.42□□□□□ -1.86
LAMA3Q16787 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.41□□□□□ -1.86
LAMA3Q16787 RN7SKP220-201ENST00000410611 288 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 AC022018.1-201ENST00000430685 241 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 AC096638.2-201ENST00000434965 711 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.41□□□□□ -1.86
LAMA3Q16787 ARL4AP3-201ENST00000441452 574 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 UBE2V2P4-201ENST00000447495 259 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 AL121766.1-201ENST00000547436 487 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 AC007619.2-201ENST00000605743 379 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.41□□□□□ -1.86
LAMA3Q16787 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.41□□□□□ -1.86
LAMA3Q16787 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LAMA3Q16787 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.41□□□□□ -1.86
LAMA3Q16787 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LAMA3Q16787 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
LAMA3Q16787 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LAMA3Q16787 DPPA2P2-201ENST00000418220 897 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.41□□□□□ -1.86
LAMA3Q16787 DEFB109F-201ENST00000491870 277 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 AC109329.2-201ENST00000519658 482 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 AC099063.3-201ENST00000642066 185 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 AC112198.2-201ENST00000426589 6996 ntBASIC3.41□□□□□ -1.86
LAMA3Q16787 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LAMA3Q16787 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC3.41□□□□□ -1.86
LAMA3Q16787 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LAMA3Q16787 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LAMA3Q16787 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.41□□□□□ -1.86
LAMA3Q16787 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.41□□□□□ -1.86
LAMA3Q16787 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.41□□□□□ -1.86
LAMA3Q16787 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
LAMA3Q16787 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.41□□□□□ -1.86
LAMA3Q16787 NMD3P1-201ENST00000439704 1488 ntBASIC3.4□□□□□ -1.86
LAMA3Q16787 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LAMA3Q16787 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
LAMA3Q16787 RNA5SP184-201ENST00000411071 108 ntBASIC3.4□□□□□ -1.86
LAMA3Q16787 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC3.4□□□□□ -1.86
LAMA3Q16787 AL357552.1-201ENST00000445254 415 ntBASIC3.4□□□□□ -1.86
LAMA3Q16787 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.4□□□□□ -1.86
LAMA3Q16787 AC010306.1-201ENST00000523223 1117 ntBASIC3.4□□□□□ -1.86
LAMA3Q16787 AP000926.4-201ENST00000527351 454 ntBASIC3.4□□□□□ -1.86
LAMA3Q16787 AL358913.1-201ENST00000554342 121 ntBASIC3.4□□□□□ -1.86
LAMA3Q16787 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.4□□□□□ -1.86
LAMA3Q16787 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.4□□□□□ -1.86
LAMA3Q16787 AC091905.1-201ENST00000624400 311 ntBASIC3.4□□□□□ -1.86
LAMA3Q16787 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.4□□□□□ -1.86
LAMA3Q16787 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
LAMA3Q16787 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LAMA3Q16787 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LAMA3Q16787 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC3.4□□□□□ -1.87
LAMA3Q16787 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.4□□□□□ -1.87
LAMA3Q16787 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms