Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CACNA1SQ13698 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CACNA1SQ13698 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 LINC02471-203ENST00000641941 4752 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 RN7SKP111-201ENST00000410349 271 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 AL513175.1-201ENST00000431492 780 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 RPS20P1-201ENST00000434853 354 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CACNA1SQ13698 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 HIGD1AP1-201ENST00000550979 275 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 AC006504.3-201ENST00000586818 523 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 AC107294.1-201ENST00000609524 467 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 AL732372.2-225ENST00000642124 456 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CACNA1SQ13698 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.19□□□□□ -1.74
CACNA1SQ13698 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.19□□□□□ -1.74
CACNA1SQ13698 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.19□□□□□ -1.74
CACNA1SQ13698 HMGN1P24-201ENST00000412282 298 ntBASIC4.19□□□□□ -1.74
CACNA1SQ13698 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.19□□□□□ -1.74
CACNA1SQ13698 AC002075.2-201ENST00000425207 252 ntBASIC4.19□□□□□ -1.74
CACNA1SQ13698 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.19□□□□□ -1.74
CACNA1SQ13698 AC074367.1-201ENST00000438685 1125 ntBASIC4.19□□□□□ -1.74
CACNA1SQ13698 AC099560.2-201ENST00000457554 255 ntBASIC4.19□□□□□ -1.74
CACNA1SQ13698 FCF1P3-201ENST00000496394 590 ntBASIC4.19□□□□□ -1.74
CACNA1SQ13698 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.19□□□□□ -1.74
CACNA1SQ13698 AC112198.1-201ENST00000505369 1220 ntBASIC4.19□□□□□ -1.74
CACNA1SQ13698 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.19□□□□□ -1.74
CACNA1SQ13698 APOOP4-201ENST00000513530 597 ntBASIC4.19□□□□□ -1.74
CACNA1SQ13698 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.19□□□□□ -1.74
CACNA1SQ13698 AL451007.1-201ENST00000595491 289 ntBASIC4.19□□□□□ -1.74
CACNA1SQ13698 AC124312.4-201ENST00000605533 310 ntBASIC4.19□□□□□ -1.74
CACNA1SQ13698 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.19□□□□□ -1.74
CACNA1SQ13698 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CACNA1SQ13698 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CACNA1SQ13698 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CACNA1SQ13698 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CACNA1SQ13698 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CACNA1SQ13698 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 RPL5P23-201ENST00000496040 868 ntBASIC4.18□□□□□ -1.74
CACNA1SQ13698 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 AC004024.1-201ENST00000549244 247 ntBASIC4.18□□□□□ -1.74
CACNA1SQ13698 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 AC034105.3-201ENST00000565294 442 ntBASIC4.18□□□□□ -1.74
CACNA1SQ13698 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 TNPO1P3-201ENST00000436471 2662 ntBASIC4.18□□□□□ -1.74
CACNA1SQ13698 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CACNA1SQ13698 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CACNA1SQ13698 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 RNA5SP229-201ENST00000410809 99 ntBASIC4.18□□□□□ -1.74
CACNA1SQ13698 COTL1P1-201ENST00000422309 375 ntBASIC4.18□□□□□ -1.74
CACNA1SQ13698 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 OR9N1P-201ENST00000491296 333 ntBASIC4.18□□□□□ -1.74
CACNA1SQ13698 HMGB1P21-201ENST00000502313 581 ntBASIC4.18□□□□□ -1.74
CACNA1SQ13698 AC008885.1-201ENST00000514930 301 ntBASIC4.18□□□□□ -1.74
CACNA1SQ13698 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 MIR7851-201ENST00000610611 160 ntBASIC4.18□□□□□ -1.74
CACNA1SQ13698 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CACNA1SQ13698 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.17□□□□□ -1.74
CACNA1SQ13698 AL645568.2-201ENST00000432815 1337 ntBASIC4.17□□□□□ -1.74
CACNA1SQ13698 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.17□□□□□ -1.74
CACNA1SQ13698 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CACNA1SQ13698 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.17□□□□□ -1.74
CACNA1SQ13698 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CACNA1SQ13698 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CACNA1SQ13698 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CACNA1SQ13698 SNORA44-201ENST00000384584 132 ntBASIC4.17□□□□□ -1.74
CACNA1SQ13698 AL024507.1-201ENST00000412741 274 ntBASIC4.17□□□□□ -1.74
CACNA1SQ13698 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.17□□□□□ -1.74
CACNA1SQ13698 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.17□□□□□ -1.74
CACNA1SQ13698 AP001992.1-205ENST00000462248 379 ntBASIC4.17□□□□□ -1.74
CACNA1SQ13698 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.17□□□□□ -1.74
CACNA1SQ13698 AC005798.1-201ENST00000513715 387 ntBASIC4.17□□□□□ -1.74
CACNA1SQ13698 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.17□□□□□ -1.74
CACNA1SQ13698 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.17□□□□□ -1.74
CACNA1SQ13698 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.17□□□□□ -1.74
CACNA1SQ13698 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CACNA1SQ13698 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CACNA1SQ13698 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CACNA1SQ13698 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CACNA1SQ13698 SNORA80A-201ENST00000363922 136 ntBASIC4.16□□□□□ -1.74
CACNA1SQ13698 MTND4P22-201ENST00000413116 1169 ntBASIC4.16□□□□□ -1.74
CACNA1SQ13698 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CACNA1SQ13698 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.16□□□□□ -1.74
CACNA1SQ13698 RPL12P46-201ENST00000436610 195 ntBASIC4.16□□□□□ -1.74
CACNA1SQ13698 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.16□□□□□ -1.74
CACNA1SQ13698 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.16□□□□□ -1.74
CACNA1SQ13698 RN7SL594P-201ENST00000470590 287 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms