Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC078785.3-201ENST00000476607 425 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 RPL12P30-201ENST00000488389 499 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH1Q08174 RNU6-1170P-201ENST00000515974 106 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 RNU6-410P-201ENST00000517006 107 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 AC130365.2-201ENST00000525882 1201 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH1Q08174 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDH1Q08174 LSM6P2-201ENST00000552208 177 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 AL845552.1-201ENST00000556820 323 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH1Q08174 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDH1Q08174 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDH1Q08174 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDH1Q08174 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDH1Q08174 AL360012.1-201ENST00000602813 131 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 AC087763.1-201ENST00000603391 286 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 RPL12P48-201ENST00000605620 304 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 CR392039.4-201ENST00000624968 501 ntBASIC5.86□□□□□ -1.47
PCDH1Q08174 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDH1Q08174 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDH1Q08174 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDH1Q08174 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDH1Q08174 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
PCDH1Q08174 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 AC092070.2-203ENST00000598377 3644 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 AL359976.1-201ENST00000418655 3528 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDH1Q08174 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 RNA5SP110-201ENST00000362638 115 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 RNY4P16-201ENST00000364768 94 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 RNU6-1160P-201ENST00000384546 104 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDH1Q08174 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 RNA5SP156-201ENST00000410250 110 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 NDUFB4P5-201ENST00000415445 361 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 AC073136.2-201ENST00000417282 849 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 MRPS21P2-201ENST00000424704 264 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 TIMM8BP2-201ENST00000445940 251 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDH1Q08174 HMGN2P26-201ENST00000463169 339 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 AL163973.1-201ENST00000484753 577 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 AC005912.1-201ENST00000495392 255 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDH1Q08174 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDH1Q08174 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDH1Q08174 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDH1Q08174 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDH1Q08174 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 MTCYBP13-201ENST00000578634 1093 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDH1Q08174 SMIM12P1-201ENST00000603004 274 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 RPSAP75-201ENST00000605848 301 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 MIR7109-201ENST00000613748 65 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 AC040896.1-201ENST00000613819 479 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 AC069234.4-201ENST00000621276 412 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDH1Q08174 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PCDH1Q08174 AL355834.1-201ENST00000556602 3965 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.85□□□□□ -1.47
PCDH1Q08174 THAP12P9-201ENST00000503971 2360 ntBASIC5.85□□□□□ -1.47
PCDH1Q08174 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDH1Q08174 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDH1Q08174 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PCDH1Q08174 AF287957.1-201ENST00000607368 1595 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PCDH1Q08174 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PCDH1Q08174 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH1Q08174 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDH1Q08174 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH1Q08174 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
PCDH1Q08174 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH1Q08174 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDH1Q08174 AP002512.4-202ENST00000641599 4530 ntBASIC5.84□□□□□ -1.47
PCDH1Q08174 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDH1Q08174 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms