Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 IGHV3-32-201ENST00000519182 355 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AC013828.2-201ENST00000532487 235 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX6-1P78426 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX6-1P78426 H3F3BP2-201ENST00000583907 357 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AC087683.1-201ENST00000591187 441 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 BBIP1P1-201ENST00000602999 279 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AP000403.1-201ENST00000603349 851 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AC090186.1-201ENST00000605991 572 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AC027807.2-201ENST00000616099 408 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AL359740.1-201ENST00000624340 592 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX6-1P78426 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX6-1P78426 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX6-1P78426 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX6-1P78426 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX6-1P78426 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX6-1P78426 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX6-1P78426 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX6-1P78426 MTND4P26-201ENST00000415971 1359 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
NKX6-1P78426 OR4F13P-202ENST00000560066 2054 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX6-1P78426 DCAF13P1-201ENST00000495256 1330 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 OR11H5P-202ENST00000641612 1325 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX6-1P78426 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX6-1P78426 AL022322.2-201ENST00000624072 20397 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NKX6-1P78426 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NKX6-1P78426 RNA5SP305-201ENST00000362665 119 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 U8.14-201ENST00000390843 143 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 RNU6-952P-201ENST00000391164 108 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 DEFB108C-201ENST00000400154 252 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX6-1P78426 RN7SKP56-201ENST00000410513 331 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 MTCO2P5-201ENST00000422621 426 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX6-1P78426 OR4F13P-201ENST00000428478 931 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX6-1P78426 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AC087312.1-201ENST00000471411 480 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 RN7SL447P-201ENST00000494711 245 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AC022447.3-201ENST00000506865 495 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX6-1P78426 CDC42P4-201ENST00000510507 563 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX6-1P78426 SNORD116-26-201ENST00000516006 96 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 RNU6-513P-201ENST00000516104 104 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX6-1P78426 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AC006272.2-201ENST00000594725 163 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX6-1P78426 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AC015540.1-201ENST00000615828 501 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 AL357080.1-201ENST00000617394 239 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX6-1P78426 AC009318.4-201ENST00000620496 486 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NKX6-1P78426 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX6-1P78426 AL022578.1-201ENST00000439330 1433 ntBASIC4.77□□□□□ -1.65
NKX6-1P78426 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX6-1P78426 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX6-1P78426 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NKX6-1P78426 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX6-1P78426 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 AC009962.1-201ENST00000567327 3813 ntBASIC4.76□□□□□ -1.65
NKX6-1P78426 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX6-1P78426 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms