Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNA1P78396 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCNA1P78396 AL160275.2-201ENST00000412010 394 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 AC009237.5-201ENST00000414271 501 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 RPL31P45-201ENST00000419532 356 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 DYNLL1P7-201ENST00000429273 258 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 HLA-N-201ENST00000437516 135 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNA1P78396 AC069285.2-201ENST00000440210 275 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.34□□□□□ -1.71
CCNA1P78396 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.34□□□□□ -1.71
CCNA1P78396 AL121877.1-201ENST00000453704 622 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 SNORD108-201ENST00000459332 71 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNA1P78396 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCNA1P78396 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.34□□□□□ -1.71
CCNA1P78396 FTH1P9-201ENST00000513251 355 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNA1P78396 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.34□□□□□ -1.71
CCNA1P78396 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNA1P78396 AC090281.1-201ENST00000523019 276 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.34□□□□□ -1.71
CCNA1P78396 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNA1P78396 GNRHR2P1-201ENST00000555315 631 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNA1P78396 MIR5195-201ENST00000583555 115 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.34□□□□□ -1.71
CCNA1P78396 AC244505.7-201ENST00000599675 272 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 RNU1-30P-201ENST00000606575 163 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNA1P78396 AC009237.17-201ENST00000618111 748 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 AL713922.2-201ENST00000619384 716 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCNA1P78396 AC244258.1-201ENST00000637553 1071 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 AC083899.2-201ENST00000423285 1376 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNA1P78396 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCNA1P78396 AC032011.1-201ENST00000611703 1549 ntBASIC4.34□□□□□ -1.71
CCNA1P78396 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCNA1P78396 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CCNA1P78396 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.34□□□□□ -1.72
CCNA1P78396 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCNA1P78396 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNA1P78396 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCNA1P78396 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.33□□□□□ -1.72
CCNA1P78396 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCNA1P78396 MIR7-1-201ENST00000384871 110 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AL590290.1-201ENST00000405336 380 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.33□□□□□ -1.72
CCNA1P78396 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCNA1P78396 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNA1P78396 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNA1P78396 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.33□□□□□ -1.72
CCNA1P78396 EIF4EP1-201ENST00000422311 642 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AC092832.1-201ENST00000422934 400 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCNA1P78396 VN1R25P-201ENST00000443385 738 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 RPL21P23-201ENST00000446654 460 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCNA1P78396 PPIAP3-201ENST00000450588 505 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AC073387.1-201ENST00000453261 709 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 VN1R40P-201ENST00000455196 941 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AC010469.1-201ENST00000463864 576 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 RPL32P34-201ENST00000486380 400 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AC108941.1-201ENST00000502853 530 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 FTH1P24-201ENST00000503502 462 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNA1P78396 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCNA1P78396 RNU6-491P-201ENST00000516099 110 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.33□□□□□ -1.72
CCNA1P78396 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CCNA1P78396 ZNF415P1-201ENST00000582279 1166 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 VN1R79P-201ENST00000593540 513 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AC020914.6-201ENST00000594327 272 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AC010591.1-201ENST00000603941 649 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 AL669942.2-201ENST00000620352 697 ntBASIC4.33□□□□□ -1.72
CCNA1P78396 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CCNA1P78396 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNA1P78396 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNA1P78396 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCNA1P78396 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CCNA1P78396 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNA1P78396 AC007685.1-201ENST00000329806 452 ntBASIC4.32□□□□□ -1.72
CCNA1P78396 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNA1P78396 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNA1P78396 RNU1-108P-201ENST00000362556 161 ntBASIC4.32□□□□□ -1.72
CCNA1P78396 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.32□□□□□ -1.72
CCNA1P78396 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.32□□□□□ -1.72
CCNA1P78396 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNA1P78396 AL160175.1-201ENST00000428124 247 ntBASIC4.32□□□□□ -1.72
CCNA1P78396 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNA1P78396 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.32□□□□□ -1.72
CCNA1P78396 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNA1P78396 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNA1P78396 UBDP1-202ENST00000457888 382 ntBASIC4.32□□□□□ -1.72
CCNA1P78396 AC092045.1-201ENST00000495716 1231 ntBASIC4.32□□□□□ -1.72
CCNA1P78396 IGHV3-32-201ENST00000519182 355 ntBASIC4.32□□□□□ -1.72
CCNA1P78396 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.32□□□□□ -1.72
CCNA1P78396 MIR3200-201ENST00000580767 85 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms