Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.22□□□□□ -2.05
RPL39P62891 USP9YP7-201ENST00000436723 430 ntBASIC2.22□□□□□ -2.05
RPL39P62891 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.22□□□□□ -2.05
RPL39P62891 RPS12P18-201ENST00000442381 270 ntBASIC2.22□□□□□ -2.05
RPL39P62891 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC2.22□□□□□ -2.05
RPL39P62891 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.22□□□□□ -2.05
RPL39P62891 TPT1P12-201ENST00000448968 492 ntBASIC2.22□□□□□ -2.05
RPL39P62891 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.22□□□□□ -2.05
RPL39P62891 USP9YP32-201ENST00000452432 430 ntBASIC2.22□□□□□ -2.05
RPL39P62891 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.22□□□□□ -2.05
RPL39P62891 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.22□□□□□ -2.05
RPL39P62891 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.22□□□□□ -2.05
RPL39P62891 RPL21P18-201ENST00000469899 480 ntBASIC2.22□□□□□ -2.05
RPL39P62891 AC005726.1-201ENST00000494679 427 ntBASIC2.22□□□□□ -2.05
RPL39P62891 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
RPL39P62891 AC104619.4-201ENST00000510773 249 ntBASIC2.22□□□□□ -2.05
RPL39P62891 NDUFB4P9-201ENST00000511646 388 ntBASIC2.22□□□□□ -2.05
RPL39P62891 RN7SKP43-201ENST00000516173 320 ntBASIC2.22□□□□□ -2.05
RPL39P62891 CDH12P4-201ENST00000517835 295 ntBASIC2.22□□□□□ -2.05
RPL39P62891 CDH12P3-201ENST00000517935 295 ntBASIC2.22□□□□□ -2.05
RPL39P62891 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.22□□□□□ -2.05
RPL39P62891 CDH12P1-201ENST00000518435 295 ntBASIC2.22□□□□□ -2.05
RPL39P62891 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.22□□□□□ -2.05
RPL39P62891 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC2.22□□□□□ -2.05
RPL39P62891 OR4A2P-201ENST00000527276 913 ntBASIC2.22□□□□□ -2.05
RPL39P62891 DEFB109D-201ENST00000529497 240 ntBASIC2.22□□□□□ -2.05
RPL39P62891 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.22□□□□□ -2.05
RPL39P62891 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.22□□□□□ -2.05
RPL39P62891 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.22□□□□□ -2.05
RPL39P62891 AL590392.1-201ENST00000604960 446 ntBASIC2.22□□□□□ -2.05
RPL39P62891 AC005972.3-201ENST00000606304 481 ntBASIC2.22□□□□□ -2.05
RPL39P62891 uc_338.25-201ENST00000613756 156 ntBASIC2.22□□□□□ -2.05
RPL39P62891 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RPL39P62891 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPL39P62891 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPL39P62891 AC092326.2-201ENST00000624772 1561 ntBASIC2.22□□□□□ -2.05
RPL39P62891 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC2.22□□□□□ -2.05
RPL39P62891 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPL39P62891 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.21□□□□□ -2.05
RPL39P62891 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.21□□□□□ -2.06
RPL39P62891 Z73965.1-201ENST00000623412 2297 ntBASIC2.21□□□□□ -2.06
RPL39P62891 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPL39P62891 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPL39P62891 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPL39P62891 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.21□□□□□ -2.06
RPL39P62891 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RPL39P62891 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPL39P62891 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.21□□□□□ -2.06
RPL39P62891 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.21□□□□□ -2.06
RPL39P62891 AC073063.1-201ENST00000434352 607 ntBASIC2.21□□□□□ -2.06
RPL39P62891 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.21□□□□□ -2.06
RPL39P62891 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPL39P62891 NDUFA5P9-201ENST00000472609 340 ntBASIC2.21□□□□□ -2.06
RPL39P62891 AC007688.1-201ENST00000475592 759 ntBASIC2.21□□□□□ -2.06
RPL39P62891 AP004217.1-201ENST00000480579 346 ntBASIC2.21□□□□□ -2.06
RPL39P62891 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.21□□□□□ -2.06
RPL39P62891 RPS27AP18-201ENST00000515536 459 ntBASIC2.21□□□□□ -2.06
RPL39P62891 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.21□□□□□ -2.06
RPL39P62891 AC090819.1-201ENST00000523800 1111 ntBASIC2.21□□□□□ -2.06
RPL39P62891 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.21□□□□□ -2.06
RPL39P62891 MIR4506-201ENST00000584693 77 ntBASIC2.21□□□□□ -2.06
RPL39P62891 MIR4276-201ENST00000584832 70 ntBASIC2.21□□□□□ -2.06
RPL39P62891 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.21□□□□□ -2.06
RPL39P62891 U3.45-201ENST00000607547 219 ntBASIC2.21□□□□□ -2.06
RPL39P62891 AC103710.3-201ENST00000608157 948 ntBASIC2.21□□□□□ -2.06
RPL39P62891 AC010435.1-201ENST00000623353 1177 ntBASIC2.21□□□□□ -2.06
RPL39P62891 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.21□□□□□ -2.06
RPL39P62891 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
RPL39P62891 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.2□□□□□ -2.06
RPL39P62891 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.2□□□□□ -2.06
RPL39P62891 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RPL39P62891 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 AC090971.4-201ENST00000560291 1800 ntBASIC2.2□□□□□ -2.06
RPL39P62891 SNORD6-201ENST00000365444 73 ntBASIC2.2□□□□□ -2.06
RPL39P62891 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RPL39P62891 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.2□□□□□ -2.06
RPL39P62891 BX323014.1-201ENST00000412876 237 ntBASIC2.2□□□□□ -2.06
RPL39P62891 AC234781.4-201ENST00000419384 244 ntBASIC2.2□□□□□ -2.06
RPL39P62891 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.2□□□□□ -2.06
RPL39P62891 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.2□□□□□ -2.06
RPL39P62891 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.2□□□□□ -2.06
RPL39P62891 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.2□□□□□ -2.06
RPL39P62891 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.2□□□□□ -2.06
RPL39P62891 AL035404.1-201ENST00000497982 568 ntBASIC2.2□□□□□ -2.06
RPL39P62891 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
RPL39P62891 RNA5SP385-201ENST00000515947 110 ntBASIC2.2□□□□□ -2.06
RPL39P62891 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 NPM1P35-201ENST00000533043 868 ntBASIC2.2□□□□□ -2.06
RPL39P62891 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.2□□□□□ -2.06
RPL39P62891 HIGD1AP1-201ENST00000550979 275 ntBASIC2.2□□□□□ -2.06
RPL39P62891 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.2□□□□□ -2.06
RPL39P62891 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
RPL39P62891 AC018552.1-201ENST00000562099 811 ntBASIC2.2□□□□□ -2.06
RPL39P62891 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RPL39P62891 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.2□□□□□ -2.06
RPL39P62891 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.2□□□□□ -2.06
RPL39P62891 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.2□□□□□ -2.06
RPL39P62891 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms