Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SEPT14P24-201ENST00000447236 180 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC114755.5-201ENST00000447760 831 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC010683.1-201ENST00000473673 378 ntBASIC3.63□□□□□ -1.83
LMO4P61968 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LMO4P61968 RPL35P6-201ENST00000490024 372 ntBASIC3.63□□□□□ -1.83
LMO4P61968 RN7SL691P-201ENST00000494487 301 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC111000.2-201ENST00000507775 550 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC008958.1-201ENST00000511047 682 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 HMGB1P1-201ENST00000522557 636 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC104417.1-201ENST00000523974 751 ntBASIC3.63□□□□□ -1.83
LMO4P61968 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 AC084824.1-201ENST00000550917 1005 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC068446.3-201ENST00000555285 382 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.63□□□□□ -1.83
LMO4P61968 MTND4LP24-201ENST00000572277 291 ntBASIC3.63□□□□□ -1.83
LMO4P61968 MIR4716-201ENST00000579628 84 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.63□□□□□ -1.83
LMO4P61968 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LMO4P61968 AC067959.1-201ENST00000604334 379 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC135507.1-201ENST00000607214 561 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AL353600.1-201ENST00000608148 251 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC024257.5-201ENST00000612739 531 ntBASIC3.63□□□□□ -1.83
LMO4P61968 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
LMO4P61968 AC091905.2-201ENST00000623143 306 ntBASIC3.63□□□□□ -1.83
LMO4P61968 MIR492-201ENST00000638676 116 ntBASIC3.63□□□□□ -1.83
LMO4P61968 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.63□□□□□ -1.83
LMO4P61968 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO4P61968 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.63□□□□□ -1.83
LMO4P61968 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.63□□□□□ -1.83
LMO4P61968 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO4P61968 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO4P61968 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO4P61968 AC104118.1-201ENST00000607625 1589 ntBASIC3.63□□□□□ -1.83
LMO4P61968 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
LMO4P61968 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO4P61968 MTND4P10-201ENST00000446199 1363 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LMO4P61968 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LMO4P61968 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LMO4P61968 CYP1D1P-201ENST00000416662 1433 ntBASIC3.62□□□□□ -1.83
LMO4P61968 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.62□□□□□ -1.83
LMO4P61968 AC093536.2-201ENST00000565257 1406 ntBASIC3.62□□□□□ -1.83
LMO4P61968 SGO1P1-201ENST00000603525 1447 ntBASIC3.62□□□□□ -1.83
LMO4P61968 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LMO4P61968 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
LMO4P61968 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LMO4P61968 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LMO4P61968 DDX18P3-201ENST00000404856 2007 ntBASIC3.62□□□□□ -1.83
LMO4P61968 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LMO4P61968 AL353743.4-201ENST00000422653 1547 ntBASIC3.62□□□□□ -1.83
LMO4P61968 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LMO4P61968 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LMO4P61968 Y_RNA.51-201ENST00000362725 102 ntBASIC3.62□□□□□ -1.83
LMO4P61968 RNA5SP151-201ENST00000365632 117 ntBASIC3.62□□□□□ -1.83
LMO4P61968 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.62□□□□□ -1.83
LMO4P61968 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LMO4P61968 OR52E6-202ENST00000379946 954 ntBASIC3.62□□□□□ -1.83
LMO4P61968 RNU1-63P-201ENST00000383902 164 ntBASIC3.62□□□□□ -1.83
LMO4P61968 RNU6-83P-201ENST00000384568 112 ntBASIC3.62□□□□□ -1.83
LMO4P61968 RNU6-932P-201ENST00000391108 106 ntBASIC3.62□□□□□ -1.83
LMO4P61968 AL161909.1-201ENST00000397390 712 ntBASIC3.62□□□□□ -1.83
LMO4P61968 HMGB3P18-201ENST00000406327 590 ntBASIC3.62□□□□□ -1.83
LMO4P61968 MIR1303-201ENST00000408625 86 ntBASIC3.62□□□□□ -1.83
LMO4P61968 SNORA11-201ENST00000408789 128 ntBASIC3.62□□□□□ -1.83
LMO4P61968 Y_RNA.599-201ENST00000410489 109 ntBASIC3.62□□□□□ -1.83
LMO4P61968 RN7SKP263-201ENST00000411194 309 ntBASIC3.62□□□□□ -1.83
LMO4P61968 RPS20P14-201ENST00000412545 360 ntBASIC3.62□□□□□ -1.83
LMO4P61968 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.62□□□□□ -1.83
LMO4P61968 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.62□□□□□ -1.83
LMO4P61968 AL035407.1-201ENST00000429211 571 ntBASIC3.62□□□□□ -1.83
LMO4P61968 DYNLL1P7-201ENST00000429273 258 ntBASIC3.62□□□□□ -1.83
LMO4P61968 ETF1P3-201ENST00000430422 1160 ntBASIC3.62□□□□□ -1.83
LMO4P61968 AC010153.1-201ENST00000432862 727 ntBASIC3.62□□□□□ -1.83
LMO4P61968 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.62□□□□□ -1.83
LMO4P61968 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.62□□□□□ -1.83
LMO4P61968 MTND4P6-201ENST00000438297 472 ntBASIC3.62□□□□□ -1.83
LMO4P61968 GEMIN8P3-201ENST00000445417 720 ntBASIC3.62□□□□□ -1.83
LMO4P61968 AC104978.1-201ENST00000449387 391 ntBASIC3.62□□□□□ -1.83
LMO4P61968 RPS27AP8-201ENST00000452665 445 ntBASIC3.62□□□□□ -1.83
LMO4P61968 AC244505.3-201ENST00000454598 187 ntBASIC3.62□□□□□ -1.83
LMO4P61968 GTF2IP12-201ENST00000456547 356 ntBASIC3.62□□□□□ -1.83
LMO4P61968 RPL37P3-201ENST00000456825 293 ntBASIC3.62□□□□□ -1.83
LMO4P61968 TRBV8-2-201ENST00000475637 270 ntBASIC3.62□□□□□ -1.83
LMO4P61968 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.62□□□□□ -1.83
LMO4P61968 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.62□□□□□ -1.83
LMO4P61968 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.62□□□□□ -1.83
LMO4P61968 RPF2P2-201ENST00000504693 896 ntBASIC3.62□□□□□ -1.83
LMO4P61968 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.62□□□□□ -1.83
LMO4P61968 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.62□□□□□ -1.83
LMO4P61968 AC008494.2-201ENST00000514544 370 ntBASIC3.62□□□□□ -1.83
LMO4P61968 RNA5SP49-201ENST00000516450 115 ntBASIC3.62□□□□□ -1.83
LMO4P61968 RNU5A-4P-201ENST00000516588 111 ntBASIC3.62□□□□□ -1.83
LMO4P61968 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms