Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH12P55289 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH12P55289 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC084824.1-201ENST00000550917 1005 ntBASIC4.3□□□□□ -1.72
CDH12P55289 HMGN2P6-201ENST00000551091 273 ntBASIC4.3□□□□□ -1.72
CDH12P55289 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.3□□□□□ -1.72
CDH12P55289 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH12P55289 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH12P55289 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH12P55289 AC011260.1-201ENST00000578420 472 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC091178.1-203ENST00000584586 279 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH12P55289 HMGB2P1-201ENST00000591146 634 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.3□□□□□ -1.72
CDH12P55289 AL590229.1-201ENST00000603497 542 ntBASIC4.3□□□□□ -1.72
CDH12P55289 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC092140.2-201ENST00000618027 521 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CDH12P55289 AC055839.1-201ENST00000634467 498 ntBASIC4.3□□□□□ -1.72
CDH12P55289 FP325313.1-201ENST00000638228 703 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AL596275.2-204ENST00000641628 552 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AL596275.2-206ENST00000641957 626 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH12P55289 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH12P55289 AC017104.4-201ENST00000636283 1592 ntBASIC4.3□□□□□ -1.72
CDH12P55289 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH12P55289 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH12P55289 AC005332.5-201ENST00000591222 2919 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH12P55289 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH12P55289 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH12P55289 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH12P55289 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH12P55289 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH12P55289 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH12P55289 AC107982.1-201ENST00000507171 1300 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AL442639.1-201ENST00000625030 1899 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AC104118.1-201ENST00000607625 1589 ntBASIC4.29□□□□□ -1.72
CDH12P55289 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH12P55289 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH12P55289 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH12P55289 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH12P55289 RN7SKP149-201ENST00000363008 344 ntBASIC4.29□□□□□ -1.72
CDH12P55289 RN7SKP115-201ENST00000363177 317 ntBASIC4.29□□□□□ -1.72
CDH12P55289 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH12P55289 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH12P55289 SNORA68.2-201ENST00000391263 128 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH12P55289 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH12P55289 MIR1178-201ENST00000408396 91 ntBASIC4.29□□□□□ -1.72
CDH12P55289 GSTM3P2-201ENST00000412746 530 ntBASIC4.29□□□□□ -1.72
CDH12P55289 BTF3L4P1-201ENST00000413813 468 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH12P55289 RPL23AP27-201ENST00000415161 451 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH12P55289 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH12P55289 BX510359.3-201ENST00000422168 306 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH12P55289 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH12P55289 RPL31P54-201ENST00000429803 370 ntBASIC4.29□□□□□ -1.72
CDH12P55289 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH12P55289 CEACAMP7-201ENST00000444105 496 ntBASIC4.29□□□□□ -1.72
CDH12P55289 OR52J1P-201ENST00000450596 932 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.29□□□□□ -1.72
CDH12P55289 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH12P55289 MTND4LP3-201ENST00000468320 276 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH12P55289 AC012158.1-204ENST00000483430 465 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AC080014.1-201ENST00000496877 1201 ntBASIC4.29□□□□□ -1.72
CDH12P55289 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH12P55289 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH12P55289 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 KRT19P6-201ENST00000510983 209 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.29□□□□□ -1.72
CDH12P55289 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH12P55289 RNY4P37-201ENST00000516225 96 ntBASIC4.29□□□□□ -1.72
CDH12P55289 SNORA48.10-201ENST00000516965 160 ntBASIC4.29□□□□□ -1.72
CDH12P55289 RNU6-1261P-201ENST00000517194 104 ntBASIC4.29□□□□□ -1.72
CDH12P55289 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH12P55289 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH12P55289 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH12P55289 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH12P55289 AC093519.1-201ENST00000566109 298 ntBASIC4.29□□□□□ -1.72
CDH12P55289 RN7SL176P-201ENST00000580352 264 ntBASIC4.29□□□□□ -1.72
CDH12P55289 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.29□□□□□ -1.72
CDH12P55289 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 AC011487.3-201ENST00000593607 453 ntBASIC4.29□□□□□ -1.72
CDH12P55289 RPL7P50-201ENST00000600588 727 ntBASIC4.29□□□□□ -1.72
CDH12P55289 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH12P55289 AC112220.3-201ENST00000605502 502 ntBASIC4.29□□□□□ -1.72
CDH12P55289 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 Z69908.1-201ENST00000622603 247 ntBASIC4.29□□□□□ -1.72
CDH12P55289 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH12P55289 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH12P55289 AC010329.2-201ENST00000595195 2737 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms