Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGCS2P54868 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGCS2P54868 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HMGCS2P54868 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
HMGCS2P54868 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGCS2P54868 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.24□□□□□ -1.73
HMGCS2P54868 LINC02471-203ENST00000641941 4752 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS2P54868 SPATA2P1-201ENST00000431223 2055 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AL445437.1-201ENST00000623157 3087 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HMGCS2P54868 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS2P54868 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS2P54868 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HMGCS2P54868 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS2P54868 RNU1-33P-201ENST00000364249 162 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 SNORD51.1-201ENST00000365405 77 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC019155.1-201ENST00000382242 574 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGCS2P54868 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGCS2P54868 ATP5JP1-201ENST00000431631 322 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 RPL12P46-201ENST00000436610 195 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 VN1R48P-201ENST00000448149 1036 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 RPL21P6-201ENST00000479171 504 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC025518.1-201ENST00000479856 347 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 RPL32P34-201ENST00000486380 400 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.23□□□□□ -1.73
HMGCS2P54868 STMN1P2-201ENST00000508435 439 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS2P54868 AC025768.1-201ENST00000510057 267 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS2P54868 RN7SKP57-201ENST00000517248 293 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 MTND1P36-201ENST00000522384 936 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGCS2P54868 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGCS2P54868 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.23□□□□□ -1.73
HMGCS2P54868 NCAPGP2-201ENST00000557911 754 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGCS2P54868 TMF1P1-201ENST00000576058 373 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC133552.5-201ENST00000604266 540 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC115621.1-201ENST00000604653 858 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AL163642.2-201ENST00000604722 1019 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC005000.2-201ENST00000605468 310 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AL008729.2-201ENST00000606393 473 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC135803.1-201ENST00000608748 565 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 CR589904.2-201ENST00000612533 440 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC116447.1-201ENST00000613153 453 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AL109620.1-201ENST00000618738 1197 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 AC018816.2-201ENST00000621460 353 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGCS2P54868 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.23□□□□□ -1.73
HMGCS2P54868 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HMGCS2P54868 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMGCS2P54868 IPO8P1-201ENST00000455509 3109 ntBASIC4.23□□□□□ -1.73
HMGCS2P54868 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS2P54868 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS2P54868 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS2P54868 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS2P54868 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGCS2P54868 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCS2P54868 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGCS2P54868 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGCS2P54868 AL035458.1-201ENST00000433096 585 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 ELOCP10-201ENST00000440624 327 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 HMGB3P9-201ENST00000441799 583 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 RBMY2UP-201ENST00000453474 324 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 RPL23AP12-201ENST00000467573 473 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 AC022795.1-201ENST00000473808 480 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCS2P54868 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS2P54868 HMGB1P47-201ENST00000511281 589 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCS2P54868 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS2P54868 AC016550.3-201ENST00000515706 767 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS2P54868 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS2P54868 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS2P54868 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS2P54868 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.22□□□□□ -1.73
HMGCS2P54868 AC068714.1-201ENST00000559623 800 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS2P54868 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCS2P54868 VN1R92P-201ENST00000598511 928 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 ELOCP34-201ENST00000604436 327 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 AC006077.1-201ENST00000604746 343 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 AC005021.1-201ENST00000608730 355 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 AL133445.2-201ENST00000611191 527 ntBASIC4.22□□□□□ -1.73
HMGCS2P54868 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS2P54868 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCS2P54868 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS2P54868 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS2P54868 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HMGCS2P54868 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMGCS2P54868 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMGCS2P54868 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCS2P54868 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HMGCS2P54868 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
HMGCS2P54868 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HMGCS2P54868 AC000123.3-201ENST00000624029 4975 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms