Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC087190.4-201ENST00000574616 8334 ntBASIC4.73□□□□□ -1.65
CLTCL1P53675 AC020633.1-201ENST00000468439 2247 ntBASIC4.73□□□□□ -1.65
CLTCL1P53675 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLTCL1P53675 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLTCL1P53675 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.73□□□□□ -1.65
CLTCL1P53675 AL136116.1-201ENST00000403591 381 ntBASIC4.73□□□□□ -1.65
CLTCL1P53675 AL031121.1-201ENST00000406553 254 ntBASIC4.73□□□□□ -1.65
CLTCL1P53675 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLTCL1P53675 AL831737.1-201ENST00000441288 271 ntBASIC4.73□□□□□ -1.65
CLTCL1P53675 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.73□□□□□ -1.65
CLTCL1P53675 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.73□□□□□ -1.65
CLTCL1P53675 ACTG1P13-201ENST00000486987 1043 ntBASIC4.73□□□□□ -1.65
CLTCL1P53675 AC106785.3-201ENST00000564064 847 ntBASIC4.73□□□□□ -1.65
CLTCL1P53675 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.73□□□□□ -1.65
CLTCL1P53675 AL157817.1-201ENST00000614264 790 ntBASIC4.73□□□□□ -1.65
CLTCL1P53675 AL162274.2-201ENST00000614406 332 ntBASIC4.73□□□□□ -1.65
CLTCL1P53675 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLTCL1P53675 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLTCL1P53675 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLTCL1P53675 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLTCL1P53675 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.72□□□□□ -1.65
CLTCL1P53675 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLTCL1P53675 AC025750.2-201ENST00000442609 450 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 S100A11P2-201ENST00000467589 312 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 TMED11P-201ENST00000479478 690 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 AC020893.1-201ENST00000502452 580 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 AC008885.1-201ENST00000514930 301 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CLTCL1P53675 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.72□□□□□ -1.65
CLTCL1P53675 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.72□□□□□ -1.65
CLTCL1P53675 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.72□□□□□ -1.65
CLTCL1P53675 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.72□□□□□ -1.65
CLTCL1P53675 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.72□□□□□ -1.65
CLTCL1P53675 SCARNA15.3-201ENST00000626315 122 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 SCARNA4.1-201ENST00000628597 123 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLTCL1P53675 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.72□□□□□ -1.65
CLTCL1P53675 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLTCL1P53675 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLTCL1P53675 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CLTCL1P53675 AC092435.3-201ENST00000565538 3654 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLTCL1P53675 SNORA7.4-201ENST00000384249 137 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.72□□□□□ -1.65
CLTCL1P53675 AC093698.1-201ENST00000423843 571 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.72□□□□□ -1.65
CLTCL1P53675 AL133477.1-201ENST00000457472 514 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 AC096576.1-201ENST00000489014 359 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.72□□□□□ -1.65
CLTCL1P53675 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.72□□□□□ -1.65
CLTCL1P53675 CR383656.14-201ENST00000551951 406 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.72□□□□□ -1.65
CLTCL1P53675 AL162713.1-201ENST00000604480 262 ntBASIC4.72□□□□□ -1.65
CLTCL1P53675 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.72□□□□□ -1.65
CLTCL1P53675 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.71□□□□□ -1.65
CLTCL1P53675 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.71□□□□□ -1.65
CLTCL1P53675 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.71□□□□□ -1.65
CLTCL1P53675 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLTCL1P53675 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLTCL1P53675 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.71□□□□□ -1.66
CLTCL1P53675 RNU1-140P-201ENST00000365040 165 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.71□□□□□ -1.66
CLTCL1P53675 RNU6-1279P-201ENST00000383917 103 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 RNU4-47P-201ENST00000410876 114 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 RPS6P2-201ENST00000454208 705 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 RPL23AP73-201ENST00000492507 471 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.71□□□□□ -1.66
CLTCL1P53675 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.71□□□□□ -1.66
CLTCL1P53675 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.71□□□□□ -1.66
CLTCL1P53675 MIR4672-201ENST00000583126 81 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 AC005242.1-201ENST00000585658 438 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 AC006386.2-201ENST00000624491 75 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 AC012005.1-201ENST00000624575 75 ntBASIC4.71□□□□□ -1.66
CLTCL1P53675 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.71□□□□□ -1.66
CLTCL1P53675 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLTCL1P53675 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.7□□□□□ -1.66
CLTCL1P53675 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLTCL1P53675 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CLTCL1P53675 AL391417.1-201ENST00000404100 426 ntBASIC4.7□□□□□ -1.66
CLTCL1P53675 AL353678.1-201ENST00000422735 741 ntBASIC4.7□□□□□ -1.66
CLTCL1P53675 AC011825.1-201ENST00000484967 388 ntBASIC4.7□□□□□ -1.66
CLTCL1P53675 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.7□□□□□ -1.66
CLTCL1P53675 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.7□□□□□ -1.66
CLTCL1P53675 NARSP2-201ENST00000518524 679 ntBASIC4.7□□□□□ -1.66
CLTCL1P53675 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.7□□□□□ -1.66
CLTCL1P53675 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.7□□□□□ -1.66
CLTCL1P53675 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.7□□□□□ -1.66
CLTCL1P53675 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.7□□□□□ -1.66
CLTCL1P53675 AC141257.3-201ENST00000572906 215 ntBASIC4.7□□□□□ -1.66
CLTCL1P53675 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLTCL1P53675 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.7□□□□□ -1.66
CLTCL1P53675 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLTCL1P53675 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLTCL1P53675 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.69□□□□□ -1.66
CLTCL1P53675 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.69□□□□□ -1.66
CLTCL1P53675 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.69□□□□□ -1.66
CLTCL1P53675 HMGB3P9-201ENST00000441799 583 ntBASIC4.69□□□□□ -1.66
CLTCL1P53675 AC008264.1-201ENST00000447612 367 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms