Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.16□□□□□ -1.74
PDX1P52945 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.16□□□□□ -1.74
PDX1P52945 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PDX1P52945 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDX1P52945 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PDX1P52945 RNU4-51P-201ENST00000364206 140 ntBASIC4.16□□□□□ -1.74
PDX1P52945 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.16□□□□□ -1.74
PDX1P52945 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDX1P52945 SNORD116-12-201ENST00000384468 92 ntBASIC4.16□□□□□ -1.74
PDX1P52945 RNU6-906P-201ENST00000384700 70 ntBASIC4.16□□□□□ -1.74
PDX1P52945 SNORA68.2-201ENST00000391263 128 ntBASIC4.16□□□□□ -1.74
PDX1P52945 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
PDX1P52945 RPS24P12-201ENST00000402084 394 ntBASIC4.16□□□□□ -1.74
PDX1P52945 NCSTNP1-201ENST00000406229 144 ntBASIC4.16□□□□□ -1.74
PDX1P52945 RNU6-628P-201ENST00000410675 107 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.16□□□□□ -1.74
PDX1P52945 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.16□□□□□ -1.74
PDX1P52945 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.16□□□□□ -1.74
PDX1P52945 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PDX1P52945 AC009965.2-201ENST00000425328 970 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AL157831.1-201ENST00000426134 473 ntBASIC4.16□□□□□ -1.74
PDX1P52945 HIGD1AP12-201ENST00000427832 281 ntBASIC4.16□□□□□ -1.74
PDX1P52945 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.16□□□□□ -1.74
PDX1P52945 MTND2P5-201ENST00000432656 1006 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.16□□□□□ -1.74
PDX1P52945 RPL21P110-201ENST00000433345 446 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.16□□□□□ -1.74
PDX1P52945 OFD1P3Y-201ENST00000453312 783 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AC092155.2-201ENST00000454675 477 ntBASIC4.16□□□□□ -1.74
PDX1P52945 RPL37P3-201ENST00000456825 293 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.16□□□□□ -1.74
PDX1P52945 RN7SL542P-201ENST00000467147 294 ntBASIC4.16□□□□□ -1.74
PDX1P52945 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.16□□□□□ -1.74
PDX1P52945 RPL21P131-201ENST00000497298 483 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.16□□□□□ -1.74
PDX1P52945 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.16□□□□□ -1.74
PDX1P52945 TCP11X3P-202ENST00000514289 1254 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AC090151.1-201ENST00000520784 730 ntBASIC4.16□□□□□ -1.74
PDX1P52945 OR5BC1P-201ENST00000529327 739 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.16□□□□□ -1.74
PDX1P52945 AC110743.1-201ENST00000584870 478 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.16□□□□□ -1.74
PDX1P52945 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.16□□□□□ -1.74
PDX1P52945 AC010975.3-201ENST00000618727 978 ntBASIC4.16□□□□□ -1.74
PDX1P52945 AC068787.1-201ENST00000623908 691 ntBASIC4.16□□□□□ -1.74
PDX1P52945 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.16□□□□□ -1.74
PDX1P52945 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.16□□□□□ -1.74
PDX1P52945 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.16□□□□□ -1.74
PDX1P52945 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PDX1P52945 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PDX1P52945 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.15□□□□□ -1.74
PDX1P52945 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDX1P52945 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDX1P52945 RNA5SP130-201ENST00000364431 114 ntBASIC4.15□□□□□ -1.75
PDX1P52945 RNU1-44P-201ENST00000384453 163 ntBASIC4.15□□□□□ -1.75
PDX1P52945 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.15□□□□□ -1.75
PDX1P52945 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PDX1P52945 HDGFP1-201ENST00000405943 252 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.15□□□□□ -1.75
PDX1P52945 GSTM3P2-201ENST00000412746 530 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AL592310.1-201ENST00000414330 671 ntBASIC4.15□□□□□ -1.75
PDX1P52945 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.15□□□□□ -1.75
PDX1P52945 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.15□□□□□ -1.75
PDX1P52945 AC062016.2-201ENST00000420950 676 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.15□□□□□ -1.75
PDX1P52945 RPL7P4-203ENST00000430239 730 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.15□□□□□ -1.75
PDX1P52945 RPL21P89-201ENST00000444021 467 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.15□□□□□ -1.75
PDX1P52945 RPL5P32-201ENST00000454085 879 ntBASIC4.15□□□□□ -1.75
PDX1P52945 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.15□□□□□ -1.75
PDX1P52945 AC034236.1-201ENST00000469891 373 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AC012158.1-204ENST00000483430 465 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.15□□□□□ -1.75
PDX1P52945 AC079203.1-201ENST00000487972 404 ntBASIC4.15□□□□□ -1.75
PDX1P52945 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PDX1P52945 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.15□□□□□ -1.75
PDX1P52945 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.15□□□□□ -1.75
PDX1P52945 ATP1B1P1-201ENST00000509767 915 ntBASIC4.15□□□□□ -1.75
PDX1P52945 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.15□□□□□ -1.75
PDX1P52945 SNORA67.7-201ENST00000516664 135 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.15□□□□□ -1.75
PDX1P52945 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.15□□□□□ -1.75
PDX1P52945 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.15□□□□□ -1.75
PDX1P52945 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.15□□□□□ -1.75
PDX1P52945 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.15□□□□□ -1.75
PDX1P52945 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.15□□□□□ -1.75
PDX1P52945 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.15□□□□□ -1.75
PDX1P52945 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.15□□□□□ -1.75
PDX1P52945 RN7SL703P-201ENST00000578485 302 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AP001542.2-201ENST00000593141 364 ntBASIC4.15□□□□□ -1.75
PDX1P52945 BNIP3P22-201ENST00000593399 556 ntBASIC4.15□□□□□ -1.75
PDX1P52945 VN1R84P-201ENST00000593697 235 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AL445435.1-201ENST00000604232 665 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AL160290.3-201ENST00000604869 165 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AP005137.2-201ENST00000609238 400 ntBASIC4.15□□□□□ -1.75
PDX1P52945 FAM27D1-201ENST00000612308 341 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AC116447.1-201ENST00000613153 453 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AL158163.2-201ENST00000619110 700 ntBASIC4.15□□□□□ -1.75
PDX1P52945 AC006386.1-201ENST00000619436 415 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms