Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.46□□□□□ -1.86
GTF2A1P52655 RPS11P1-201ENST00000451072 473 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 RPL38P1-201ENST00000460914 211 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 AC091564.1-201ENST00000464563 479 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.46□□□□□ -1.86
GTF2A1P52655 AC117394.1-201ENST00000477323 567 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 RN7SL604P-201ENST00000492589 296 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 AP006245.1-201ENST00000522549 120 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
GTF2A1P52655 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.46□□□□□ -1.86
GTF2A1P52655 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.46□□□□□ -1.86
GTF2A1P52655 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.46□□□□□ -1.86
GTF2A1P52655 RNA5SP108-201ENST00000605921 117 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 MIR6868-201ENST00000611215 58 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 AC231759.1-201ENST00000616455 597 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 MIR6733-201ENST00000635723 61 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 OR5BE1P-202ENST00000641168 1176 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
GTF2A1P52655 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.46□□□□□ -1.86
GTF2A1P52655 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.46□□□□□ -1.86
GTF2A1P52655 AC108206.1-201ENST00000570186 4159 ntBASIC3.46□□□□□ -1.86
GTF2A1P52655 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GTF2A1P52655 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
GTF2A1P52655 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.45□□□□□ -1.86
GTF2A1P52655 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GTF2A1P52655 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.45□□□□□ -1.86
GTF2A1P52655 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.45□□□□□ -1.86
GTF2A1P52655 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GTF2A1P52655 RNU11-4P-201ENST00000391149 133 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 AC098592.2-201ENST00000413158 265 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 AC068533.1-201ENST00000418542 415 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.45□□□□□ -1.86
GTF2A1P52655 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.45□□□□□ -1.86
GTF2A1P52655 ELOCP6-201ENST00000429066 328 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.45□□□□□ -1.86
GTF2A1P52655 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.45□□□□□ -1.86
GTF2A1P52655 AC006466.1-201ENST00000438721 289 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 CBX1P1-201ENST00000440184 427 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 RSL24D1P2-201ENST00000445584 366 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 ELOCP12-201ENST00000458706 328 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.45□□□□□ -1.86
GTF2A1P52655 RPL32P9-201ENST00000487963 407 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 AC013356.1-201ENST00000489027 564 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.45□□□□□ -1.86
GTF2A1P52655 AC010627.1-201ENST00000503819 1294 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 AC025674.1-201ENST00000507074 324 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.45□□□□□ -1.86
GTF2A1P52655 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.45□□□□□ -1.86
GTF2A1P52655 RNA5SP208-201ENST00000516156 78 ntBASIC3.45□□□□□ -1.86
GTF2A1P52655 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.45□□□□□ -1.86
GTF2A1P52655 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.45□□□□□ -1.86
GTF2A1P52655 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.45□□□□□ -1.86
GTF2A1P52655 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.45□□□□□ -1.86
GTF2A1P52655 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.45□□□□□ -1.86
GTF2A1P52655 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.45□□□□□ -1.86
GTF2A1P52655 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.45□□□□□ -1.86
GTF2A1P52655 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GTF2A1P52655 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GTF2A1P52655 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.45□□□□□ -1.86
GTF2A1P52655 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.45□□□□□ -1.86
GTF2A1P52655 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
GTF2A1P52655 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
GTF2A1P52655 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.44□□□□□ -1.86
GTF2A1P52655 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
GTF2A1P52655 MTND4P34-201ENST00000572715 1371 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.44□□□□□ -1.86
GTF2A1P52655 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.44□□□□□ -1.86
GTF2A1P52655 MRPS18BP2-201ENST00000434310 759 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.44□□□□□ -1.86
GTF2A1P52655 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.44□□□□□ -1.86
GTF2A1P52655 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.44□□□□□ -1.86
GTF2A1P52655 RN7SL860P-201ENST00000473738 223 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 AC108475.1-201ENST00000507880 950 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.44□□□□□ -1.86
GTF2A1P52655 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
GTF2A1P52655 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.44□□□□□ -1.86
GTF2A1P52655 SYF2P1-201ENST00000550658 413 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 PSMB7P1-201ENST00000556349 514 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.44□□□□□ -1.86
GTF2A1P52655 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.44□□□□□ -1.86
GTF2A1P52655 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.44□□□□□ -1.86
GTF2A1P52655 AC005191.1-201ENST00000603950 358 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 GMCL1P2-201ENST00000605230 823 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 AP000894.4-201ENST00000610185 483 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 AC107871.2-201ENST00000612894 502 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 AL354976.1-201ENST00000613843 387 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 AC123768.4-201ENST00000616244 701 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 AP001784.1-201ENST00000624107 428 ntBASIC3.44□□□□□ -1.86
GTF2A1P52655 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.44□□□□□ -1.86
GTF2A1P52655 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.44□□□□□ -1.86
GTF2A1P52655 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
GTF2A1P52655 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
GTF2A1P52655 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
GTF2A1P52655 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
GTF2A1P52655 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GTF2A1P52655 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GTF2A1P52655 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
GTF2A1P52655 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.43□□□□□ -1.86
GTF2A1P52655 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms