Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR2JP52435 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
POLR2JP52435 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
POLR2JP52435 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR2JP52435 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR2JP52435 AC107081.3-201ENST00000612715 2034 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.15□□□□□ -1.91
POLR2JP52435 AC066616.2-201ENST00000559334 1481 ntBASIC3.15□□□□□ -1.91
POLR2JP52435 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR2JP52435 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR2JP52435 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR2JP52435 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 RNU6-729P-201ENST00000384399 107 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 MTCO3P31-201ENST00000405526 789 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 RN7SKP177-201ENST00000410567 355 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 HMGB3P5-201ENST00000428894 612 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2JP52435 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2JP52435 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.14□□□□□ -1.91
POLR2JP52435 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2JP52435 RNU7-170P-201ENST00000459303 61 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.14□□□□□ -1.91
POLR2JP52435 AC104619.4-201ENST00000510773 249 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2JP52435 APOOP4-201ENST00000513530 597 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 IGKV2-26-201ENST00000518305 343 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2JP52435 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2JP52435 AL389895.1-201ENST00000554127 252 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 GTF2IP22-201ENST00000554443 182 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 HNRNPCP4-201ENST00000571636 900 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2JP52435 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2JP52435 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.14□□□□□ -1.91
POLR2JP52435 AL591516.1-201ENST00000611326 274 ntBASIC3.14□□□□□ -1.91
POLR2JP52435 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
POLR2JP52435 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
POLR2JP52435 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2JP52435 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2JP52435 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2JP52435 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2JP52435 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2JP52435 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.14□□□□□ -1.91
POLR2JP52435 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2JP52435 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR2JP52435 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
POLR2JP52435 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
POLR2JP52435 RNU4-35P-201ENST00000362588 141 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 RNA5SP119-201ENST00000362715 117 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 U3.6-201ENST00000363622 211 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
POLR2JP52435 AL359837.1-201ENST00000381357 287 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR2JP52435 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.13□□□□□ -1.91
POLR2JP52435 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR2JP52435 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.13□□□□□ -1.91
POLR2JP52435 NUTF2P7-201ENST00000453086 375 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 RBMY2UP-201ENST00000453474 324 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
POLR2JP52435 ST13P14-201ENST00000474095 734 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 RPL23AP44-201ENST00000482216 473 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 CEACAMP10-202ENST00000495431 496 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR2JP52435 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR2JP52435 FTH1P9-201ENST00000513251 355 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.13□□□□□ -1.91
POLR2JP52435 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.13□□□□□ -1.91
POLR2JP52435 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.13□□□□□ -1.91
POLR2JP52435 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
POLR2JP52435 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.13□□□□□ -1.91
POLR2JP52435 AC023813.4-201ENST00000607580 580 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR2JP52435 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR2JP52435 HSPA8P19-201ENST00000505359 1517 ntBASIC3.13□□□□□ -1.91
POLR2JP52435 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR2JP52435 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
POLR2JP52435 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.12□□□□□ -1.91
POLR2JP52435 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
POLR2JP52435 MFSD8-220ENST00000641243 1422 ntBASIC3.12□□□□□ -1.91
POLR2JP52435 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
POLR2JP52435 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
POLR2JP52435 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.12□□□□□ -1.91
POLR2JP52435 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.12□□□□□ -1.91
POLR2JP52435 AC136624.1-201ENST00000400791 413 ntBASIC3.12□□□□□ -1.91
POLR2JP52435 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
POLR2JP52435 CASKP1-201ENST00000412870 582 ntBASIC3.12□□□□□ -1.91
POLR2JP52435 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
POLR2JP52435 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.12□□□□□ -1.91
POLR2JP52435 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.12□□□□□ -1.91
POLR2JP52435 ATP5C1P1-201ENST00000441945 895 ntBASIC3.12□□□□□ -1.91
POLR2JP52435 MTND4LP12-201ENST00000448237 295 ntBASIC3.12□□□□□ -1.91
POLR2JP52435 AGGF1P3-201ENST00000493675 1213 ntBASIC3.12□□□□□ -1.91
POLR2JP52435 AC093278.1-201ENST00000494700 600 ntBASIC3.12□□□□□ -1.91
POLR2JP52435 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.12□□□□□ -1.91
POLR2JP52435 LDHBP3-201ENST00000514909 822 ntBASIC3.12□□□□□ -1.91
POLR2JP52435 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.12□□□□□ -1.91
POLR2JP52435 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.12□□□□□ -1.91
POLR2JP52435 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.12□□□□□ -1.91
POLR2JP52435 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms